#IFECompound(s)RNA source organismTitleMethodResolutionDate
12P7E|D (rep)Vanadate at the Active Site of a Small Ribozyme Suggests a Role for Water in Transition-State StabilizationX-RAY DIFFRACTION2.052007-05-22
21X9C|DAn all-RNA Hairpin Ribozyme with mutation U39CX-RAY DIFFRACTION2.192005-11-22
31X9K|DAn all-RNA Hairpin Ribozyme with mutation U39CX-RAY DIFFRACTION3.172005-11-22
41ZFT|DThe crystal structure of an all-RNA minimal Hairpin Ribozyme with mutant G8I at the cleavage siteX-RAY DIFFRACTION2.332006-02-14
51ZFV|DThe structure of an all-RNA minimal Hairpin Ribozyme with Mutation G8A at the cleavage siteX-RAY DIFFRACTION2.42006-02-14
61ZFX|DThe Structure of a minimal all-RNA Hairpin Ribozyme with the mutant G8U at the cleavage siteX-RAY DIFFRACTION2.382006-02-14
72BCY|DCrystal Structure of a minimal, mutant all-RNA hairpin ribozyme (U39C, G8MTU)X-RAY DIFFRACTION2.72006-02-14
82BCZ|DCrystal Structure of a minimal, mutant all-RNA hairpin ribozyme (U39C, G8I, 2'deoxy A-1)X-RAY DIFFRACTION2.42006-02-14
92D2K|DCrystal Structure of a minimal, native (U39) all-RNA hairpin ribozymeX-RAY DIFFRACTION2.652005-11-01
102D2L|DCrystal Structure of a minimal, all-RNA hairpin ribozyme with a propyl linker (C3) at position U39X-RAY DIFFRACTION2.52005-11-01
112FGP|DCrystal structure of a minimal, all RNA hairpin ribozyme with modifications (g8dap, u39c) at ph 8.6X-RAY DIFFRACTION2.42006-02-14
122NPY|DCrystal Structure of a junctioned hairpin ribozyme incorporating 9atom linker and 2'-deoxy 2'-amino U at A-1X-RAY DIFFRACTION2.652007-08-14
132NPZ|DCrystal structure of junctioned hairpin ribozyme incorporating synthetic propyl linkerX-RAY DIFFRACTION3.352007-08-14
142OUE|DCrystal structure of a junctionless all-RNA hairpin ribozyme at 2.05 angstroms resolutionX-RAY DIFFRACTION2.052007-03-06
152P7D|DA Minimal, 'Hinged' Hairpin Ribozyme Construct Solved with Mimics of the Product Strands at 2.25 Angstroms ResolutionX-RAY DIFFRACTION2.252007-05-22
162P7F|DThe Novel Use of a 2',5'-Phosphodiester Linkage as a Reaction Intermediate at the Active Site of a Small RibozymeX-RAY DIFFRACTION2.352007-05-22
173GS1|DAn all-RNA Hairpin Ribozyme with mutation A38N1dAX-RAY DIFFRACTION2.852009-05-12
183GS8|DAn all-RNA hairpin ribozyme A38N1dA38 variant with a transition-state mimic substrate strandX-RAY DIFFRACTION2.852009-04-21

Release history

Release0.140.15
Date2011-04-232011-04-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength