#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V9R|1|AX (rep)P-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
24V9S|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
34V9S|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
44V9R|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
54V7M|1|AXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
64V67|1|AYP AND E-SITE TRNA(FMET), MRNAEscherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
74V63|1|AYP and E-site tRNA(fMet), mRNAEscherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
84V87|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
94V8F|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
104V9I|1|CVP-SITE tRNA, mRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
114V6A|1|CWtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
124V63|1|CYP and E-site tRNA(fMet), mRNAEscherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
134V67|1|CYP AND E-SITE TRNA(FMET), MRNAEscherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
144V8C|1|DCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
154V8B|1|ACTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
164V63|1|AZP and E-site tRNA(fMet)Escherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
174V67|1|AZP AND E-SITE TRNA(FMET)Escherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
184V8E|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
194V8Q|1|BVE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
204V8B|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
214V6G|1|CCTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
224V8C|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
234V63|1|CZP and E-site tRNA(fMet)Escherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
244V67|1|CZP AND E-SITE TRNA(FMET)Escherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
254V8E|1|DCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
264LT8|1|QVP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
274LT8|1|XVP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
284LNT|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
293CW5|1|AInitiator tRNAEscherichia coliE. coli Initiator tRNAX-RAY DIFFRACTION3.12008-09-02
304W2G|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
314W2F|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
324W2H|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
334W2I|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
341VY5|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
351VY5|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
364W2F|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
374W2I|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
384W2G|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
394V5C|1|AVP-SITE TRNA FMET, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
401VY7|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
411VY6|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
421VY4|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
431VY6|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
444WPO|1|DXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
454V8D|1|ACTRNA-FMET, MRNAEscherichia coliStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
464V9I|1|AVP-SITE tRNA, mRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
474V6A|1|AWtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
484V87|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
494V7M|1|CXRNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
504LNT|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
513CW6|1|AInitiator tRNAEscherichia coliE. coli Initiator tRNAX-RAY DIFFRACTION3.32008-09-02
524WQY|1|BXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
534V8D|1|CCTRNA-FMET, MRNAEscherichia coliStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
541VVJ|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
554LSK|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
561VVJ|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
574LSK|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
584WPO|1|BXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
594V6G|1|CBTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
604W2H|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
614WQY|1|DXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
624V51|1|AVP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
634V51|1|CVP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
644V6G|1|ACTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
654V5K|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
664V7L|1|AXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
671VY7|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
681VY4|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
692FMT|1|CFORMYL-METHIONYL-TRNAFMET2METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
702FMT|1|DFORMYL-METHIONYL-TRNAFMET2METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
714V5C|1|CVP-SITE TRNA FMET, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
725AFI|1|vP-site fMet-tRNAfMet, mRNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
734V8F|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
744V6G|1|CDTRNA FMET (UNMODIFIED BASES)Escherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
754V5K|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
764V6G|1|ADTRNA FMET (UNMODIFIED BASES)Escherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
774V7L|1|CXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
784V8Q|1|BWE-SITE or P-SITE TRNA FMETEscherichia coliComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
794V8C|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
804V8B|1|ADTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
814V87|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
824V8C|1|DDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
834V87|1|BDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
844V8B|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
855AFI|1|wP-site fMet-tRNAfMetEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
863QSY|1|DtRNAEscherichia coliRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.22012-03-21
874V5K|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
884V5K|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09

Release history

Release2.14
Date2015-03-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_35542.3NR_all_35542.22.14(86) 4WQY|1|DX, 4V8B|1|AD, 4V5K|1|AW, 4V8C|1|DD, 4V8Q|1|BV, 4V9S|1|AX, 4V87|1|CD, 4V51|1|CV, 4V63|1|CY, 4V6G|1|AD, 4V5C|1|CV, 4LT8|1|QV, 4V6G|1|CD, 1VY4|1|CX, 4V7L|1|CX, 4V8B|1|CD, 4V8D|1|CC, 4V9R|1|CX, 4V51|1|AV, 4W2H|1|CX, 4V6G|1|AC, 4W2F|1|AX, 4V8E|1|BC, 4V7L|1|AX, 4V5K|1|AV, 4LNT|1|XV, 4W2H|1|AX, 1VVJ|1|QV, 4V9S|1|CX, 4V9I|1|AV, 4V7M|1|AX, 4V8B|1|CC, 4V67|1|AZ, 1VY6|1|AX, 4LNT|1|QV, 4V5K|1|CV, 3CW6|1|A, 4W2I|1|AX, 4V8C|1|CD, 4V8Q|1|BW, 4W2F|1|CX, 1VY7|1|AX, 4V8F|1|BC, 4V87|1|BD, 4V63|1|AZ, 4V67|1|AY, 1VY5|1|CX, 4V8C|1|CC, 4LSK|1|QV, 4WPO|1|DX, 1VY4|1|AX, 1VY6|1|CX, 4V8E|1|DC, 4V87|1|BC, 4V63|1|AY, 4V6A|1|AW, 2FMT|1|D, 4V5K|1|CW, 4V6G|1|CB, 4WPO|1|BX, 1VVJ|1|XV, 4V9I|1|CV, 4W2G|1|CX, 1VY7|1|CX, 4V8F|1|CC, 4V87|1|CC, 4V7M|1|CX, 2FMT|1|C, 4V67|1|CY, 3QSY|1|D, 4WQY|1|BX, 4V8B|1|AC, 4W2I|1|CX, 4V8C|1|DC, 4W2G|1|AX, 4V5C|1|AV, 4LSK|1|XV, 3CW5|1|A, 4V6G|1|CC, 4V8D|1|AC, 4V9R|1|AX, 4LT8|1|XV, 4V6A|1|CW, 4V63|1|CZ, 4V67|1|CZ, 1VY5|1|AX(2) 5AFI|1|w, 5AFI|1|v(52) 4V6T|1|AX, 4V72|1|A3, 4P6F|1|XV, 4V4Z|1|AC, 4LFZ|1|XV, 4V6P|1|AD, 4L71|1|XV, 4V7P|1|DW, 4LEL|1|XV, 3V11|1|D, 4V74|1|A3, 1EG0|1|O, 4V6Y|1|A3, 4V78|1|A3, 4V70|1|A3, 3J5S|1|E, 4P70|1|XV, 4V97|1|AV, 4V5F|1|CW, 3J78|1|ET, 4V6N|1|BD, 4V8J|1|CV, 4V6R|1|AD, 4V76|1|A3, 4V5F|1|AW, 4V7B|1|AV, 4V6S|1|BC, 4P6F|1|QV, 4P70|1|QV, 4V6V|1|A3, 3DEG|1|B, 4L71|1|QV, 4V6O|1|AD, 4V77|1|A3, 4V75|1|A3, 4V71|1|A3, 4V8O|1|AV, 4V4X|1|AC, 4V5F|1|AV, 4V6Z|1|A3, 4LEL|1|QV, 4V7P|1|AW, 4V6Q|1|AD, 3J78|1|PT, 4V73|1|A3, 4V5F|1|CV, 4V8J|1|AV, 3J77|1|PT, 4V97|1|CV, 4LFZ|1|QV, 4V69|1|AV, 4V79|1|A3

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
21VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
34V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
44V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
54V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
64V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
74V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
84V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
94V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
104V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
114V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
124LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
134LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
144LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
151VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
164LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
174LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
181VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
194LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
204WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
214WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
221VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
231VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
241VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
254W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
264W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
274W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
284W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
294V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
304V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
314V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
324V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
334V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
344V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
354V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
364V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
374V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
384V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
394V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
404V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
415AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
424W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
434WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
444WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
454W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
461VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
471VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
484W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
494W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
501VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
511VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
524V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
534V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
544V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
554V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
564V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
574V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
584V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
594V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
604V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
614V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
624V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
634V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
644V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
654V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
664V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
675AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
684V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
694V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
704V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
714V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
724V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
734V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
744V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
754V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
764V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
774V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
784V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
794V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
804V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
814V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
824V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
834V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
843CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
853CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
862FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
872FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
883QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277