Equivalence class NR_3.5_38961.4 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7OSM|1|ASIT (rep) | Transfer RNA | PHE tRNA, MRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands | X-ray diffraction | 3 | 2021-12-08 |
| 2 | 7ZUX|1|6 | A/P tRNA | Saccharomyces cerevisiae | Eukarya | Collided ribosome in a disome unit from S. cerevisiae | Electron microscopy | 2.5 | 2023-02-22 | ||
| 3 | 6ZVI|1|d | Transfer RNA | A/P-site tRNA, mRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Mbf1-ribosome complex | Electron microscopy | 3 | 2020-09-09 |
| 4 | 6SV4|1|nb | Transfer RNA | tRNA (A/P) | Saccharomyces cerevisiae | Eukarya | RF00005 | The cryo-EM structure of SDD1-stalled collided trisome. | Electron microscopy | 3.3 | 2020-03-04 |
| 5 | 6SV4|1|nc | Transfer RNA | tRNA (A/P) | Saccharomyces cerevisiae | Eukarya | RF00005 | The cryo-EM structure of SDD1-stalled collided trisome. | Electron microscopy | 3.3 | 2020-03-04 |
Release history
| Release | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_38961.4 | NR_3.5_38961.3 | 3.271 | (4) 7OSM|1|ASIT, 6ZVI|1|d, 6SV4|1|nc, 6SV4|1|nb | (1) 7ZUX|1|6 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7ZUX|1|6 | Collided ribosome in a disome unit from S. cerevisiae | ELECTRON MICROSCOPY | 2.5 | 76 |
| 2 | 6SV4|1|nb | The cryo-EM structure of SDD1-stalled collided trisome. | ELECTRON MICROSCOPY | 3.3 | 76 |
| 3 | 6SV4|1|nc | The cryo-EM structure of SDD1-stalled collided trisome. | ELECTRON MICROSCOPY | 3.3 | 76 |
| 4 | 6ZVI|1|d | Mbf1-ribosome complex | ELECTRON MICROSCOPY | 3 | 76 |
| 5 | 7OSM|1|ASIT | Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands | X-RAY DIFFRACTION | 3 | 75 |