#IFECompound(s)RNA source organismTitleMethodResolutionDate
15UZ6|1|A (rep)RNA (25-MER), RNA (5'-D(*(8OS))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.12018-02-21
25UZ6|1|CRNA (25-MER), RNA (5'-D(*(8OS))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.12018-02-21
35UZ6|1|ERNA (25-MER), RNA (5'-D(*(8OS))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.12018-02-21
46BMD|1|CRNA (5'-R(P*GP*AP*GP*GP*UP*GP*(LCC)P*(LCC)P*GP*AP*GP*CP*GP*CP*GP*AP*AP*AP*GP*CP*GP*CP*UP*C)-3'), RNA (5'-D(*(GP3))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION32018-02-21
56BMD|1|ARNA (5'-R(P*GP*AP*GP*GP*UP*GP*(LCC)P*(LCC)P*GP*AP*GP*CP*GP*CP*GP*AP*AP*AP*GP*CP*GP*CP*UP*C)-3'), RNA (5'-D(*(GP3))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION32018-02-21
66BMD|1|ERNA (5'-R(P*GP*AP*GP*GP*UP*GP*(LCC)P*(LCC)P*GP*AP*GP*CP*GP*CP*GP*AP*AP*AP*GP*CP*GP*CP*UP*C)-3'), RNA (5'-D(*(GP3))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION32018-02-21
75V9Z|1|ARNA (25-MER), RNA (5'-R(P*GP*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImpG analogue boundX-RAY DIFFRACTION2.512018-02-21
85UX3|1|ARNA (25-MER), RNA (5'-D(*(RG))-R(P*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImpG monomer analogue and 2-MeImp-oligomer analogueX-RAY DIFFRACTION2.52018-02-21
95V0O|1|ARNA (25-MER), RNA (5'-R(*GP*CP*AP*CP*CP*UP*CP*A)-3')synthetic constructRNA hairpin structure containing 2-MeImpG analogue boundX-RAY DIFFRACTION2.72018-02-21

Release history

Release3.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.91
Date2018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15UZ6|1|ERNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.123
26BMD|1|ERNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION322
36BMD|1|CRNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION322
45UZ6|1|CRNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.123
55V0O|1|ARNA hairpin structure containing 2-MeImpG analogue boundX-RAY DIFFRACTION2.723
65UZ6|1|ARNA hairpin structure containing 2-MeImp-oligo analogueX-RAY DIFFRACTION2.123
76BMD|1|ARNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helperX-RAY DIFFRACTION322
85V9Z|1|ARNA hairpin structure containing 2-MeImpG analogue boundX-RAY DIFFRACTION2.5123
95UX3|1|ARNA hairpin structure containing 2-MeImpG monomer analogue and 2-MeImp-oligomer analogueX-RAY DIFFRACTION2.522