NR_3.5_56726.15

Members (77)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V4Q\|1\|CA (rep)	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
2	4V4H\|1\|CA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
3	4V52\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
4	4V52\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
5	4V54\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
6	4V4Q\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
7	4V64\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
8	4V6C\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
9	4V54\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
10	5J8A\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
11	4V64\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
12	5IT8\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
13	5J5B\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
14	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
15	5IT8\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
16	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
17	5J5B\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
18	4V4H\|1\|AA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
19	5J7L\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
20	4V7V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
21	5J8A\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
22	5JC9\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
23	4V7S\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
24	5JC9\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
25	4V57\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
26	4WWW\|1\|QA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
27	5J7L\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
28	4V57\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
29	4V7T\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
30	5J88\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
31	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
32	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
33	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
34	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
35	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
36	4V50\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
37	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
38	5J88\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
39	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
40	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
41	4V50\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
42	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
43	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
44	4V6C\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
45	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
46	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
47	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
48	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
49	4V7U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
50	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
51	4WF1\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
52	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
53	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
54	4V7T\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
55	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
56	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
57	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
58	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
59	4V7S\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
60	4WWW\|1\|XA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
61	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
62	4WF1\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
63	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
64	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
65	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
66	4V7V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
67	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
68	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
69	4V85\|1\|AA		16S rRNA				Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
70	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
71	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
72	4V7U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
73	3JCE\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
74	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
75	4V9C\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
76	4V9C\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
77	3JBV\|1\|A	Small subunit ribosomal RNA	RNA (1530-MER)	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27

Release history

Release	2.89	2.90	2.91	2.92	2.93	2.94
Date	2016-08-19	2016-08-26	2016-09-02	2016-09-09	2016-09-16	2016-09-23

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_56726.15	NR_all_56726.14	2.89	(77) 4V7T\|1\|CA, 4YBB\|1\|AA, 4V52\|1\|CA, 4V9O\|1\|FA, 4U25\|1\|AA, 4V7T\|1\|AA, 5JC9\|1\|BA, 5IT8\|1\|AA, 4V9P\|1\|FA, 5J91\|1\|BA, 4U27\|1\|AA, 4V7V\|1\|AA, 5IQR\|1\|2, 4V54\|1\|CA, 4V9P\|1\|BA, 4U1U\|1\|AA, 4U26\|1\|CA, 4V7U\|1\|CA, 4V54\|1\|AA, 5J5B\|1\|BA, 3JBV\|1\|A, 4WF1\|1\|AA, 4V9C\|1\|AA, 5IT8\|1\|BA, 4V64\|1\|AA, 4V9P\|1\|HA, 4U1V\|1\|AA, 4V4H\|1\|AA, 4V7V\|1\|CA, 4V57\|1\|CA, 5J7L\|1\|BA, 4U1U\|1\|CA, 4WOI\|1\|DA, 4V9D\|1\|AA, 5J7L\|1\|AA, 4U20\|1\|CA, 4V6C\|1\|CA, 4WF1\|1\|CA, 4V4Q\|1\|AA, 4V9C\|1\|CA, 4U20\|1\|AA, 4V64\|1\|CA, 5J8A\|1\|AA, 4V4H\|1\|CA, 4WWW\|1\|XA, 4V9O\|1\|DA, 5J88\|1\|BA, 4V7S\|1\|CA, 4WWW\|1\|QA, 4V50\|1\|CA, 4V9O\|1\|BA, 4U24\|1\|AA, 4V7S\|1\|AA, 4V4Q\|1\|CA, 5AFI\|1\|a, 4V9O\|1\|HA, 5J8A\|1\|BA, 4V7U\|1\|AA, 4YBB\|1\|BA, 4U25\|1\|CA, 4V52\|1\|AA, 5JC9\|1\|AA, 4V57\|1\|AA, 4V9P\|1\|DA, 3JCE\|1\|a, 4U26\|1\|AA, 5J5B\|1\|AA, 4V85\|1\|AA, 4U27\|1\|CA, 4V9D\|1\|BA, 4WOI\|1\|AA, 4V6C\|1\|AA, 4U1V\|1\|CA, 5J88\|1\|AA, 4U24\|1\|CA, 4V50\|1\|AA, 5J91\|1\|AA	(0)	(78) 4V7B\|1\|AA, 4V6Z\|1\|AA, 4V53\|1\|AA, 3J9Z\|1\|SA, 4V75\|1\|AA, 4V6Q\|1\|AA, 3J2B\|1\|N, 4V6E\|1\|AA, 3DG2\|1\|A, 4V79\|1\|AA, 4V6O\|1\|AA, 4V5Y\|1\|CA, 4V4V\|1\|AA, 4V89\|1\|AA, 4V73\|1\|AA, 4V56\|1\|AA, 3JCJ\|1\|g, 4V6V\|1\|AA, 3J2F\|1\|N, 4V6M\|1\|AA, 3J29\|1\|N, 4V7D\|1\|BA, 4V6D\|1\|AA, 4V55\|1\|AA, 4V6S\|1\|BA, 2YKR\|1\|A, 4V77\|1\|AA, 4V47\|1\|BA, 4V5H\|1\|AA, 4V71\|1\|AA, 4V66\|1\|A1, 4A2I\|1\|A, 3J2D\|1\|N, 5JU8\|1\|AA, 4V6K\|1\|BA, 4V5B\|1\|BA, 3DG5\|1\|A, 3J2H\|1\|N, 3JBU\|1\|A, 5JTE\|1\|AA, 4V74\|1\|AA, 4V6E\|1\|CA, 4V56\|1\|CA, 3JCN\|1\|a, 4V7A\|1\|AA, 4V6Y\|1\|AA, 3DG4\|1\|A, 4V4W\|1\|AA, 3J9Y\|1\|a, 4V6P\|1\|AA, 3J2A\|1\|N, 4V6D\|1\|CA, 3J2G\|1\|N, 3DG0\|1\|A, 4V78\|1\|AA, 4V5Y\|1\|AA, 4V48\|1\|BA, 4V6N\|1\|BA, 4V7I\|1\|BA, 4V72\|1\|AA, 3JCD\|1\|a, 4V6R\|1\|AA, 4V55\|1\|CA, 3J2E\|1\|N, 4V6L\|1\|AA, 4V5B\|1\|DA, 3JA1\|1\|SA, 3J28\|1\|N, 4V7C\|1\|AA, 4V69\|1\|AA, 4V53\|1\|CA, 5L3P\|1\|a, 4V76\|1\|AA, 4ADV\|1\|A, 4V65\|1\|A1, 3J2C\|1\|N, 4V6T\|1\|AA, 4V70\|1\|AA

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.5_56726.15	NR_3.5_56726.16	2.95	(77) 5JC9\|1\|BA, 4WOI\|1\|DA, 4WOI\|1\|AA, 4WF1\|1\|CA, 4WF1\|1\|AA, 4V9P\|1\|HA, 4V9P\|1\|FA, 4V9P\|1\|DA, 4V9P\|1\|BA, 4V9O\|1\|HA, 4V9O\|1\|FA, 4V9O\|1\|DA, 4V9O\|1\|BA, 4V9D\|1\|BA, 4V9D\|1\|AA, 4V9C\|1\|CA, 4V9C\|1\|AA, 4V85\|1\|AA, 4WWW\|1\|QA, 4WWW\|1\|XA, 5JC9\|1\|AA, 5J91\|1\|BA, 5J91\|1\|AA, 5J8A\|1\|BA, 5J8A\|1\|AA, 5J88\|1\|BA, 5J88\|1\|AA, 5J7L\|1\|BA, 5J7L\|1\|AA, 5J5B\|1\|BA, 5J5B\|1\|AA, 5IT8\|1\|BA, 5IT8\|1\|AA, 5IQR\|1\|2, 5AFI\|1\|a, 4YBB\|1\|BA, 4YBB\|1\|AA, 4V7V\|1\|CA, 4V7V\|1\|AA, 4V7U\|1\|CA, 4V4H\|1\|CA, 4V4H\|1\|AA, 4U27\|1\|CA, 4U27\|1\|AA, 4U26\|1\|CA, 4U26\|1\|AA, 4U25\|1\|CA, 4U25\|1\|AA, 4U24\|1\|CA, 4U24\|1\|AA, 4U20\|1\|CA, 4U20\|1\|AA, 4U1V\|1\|CA, 4U1V\|1\|AA, 4U1U\|1\|CA, 4U1U\|1\|AA, 3JCE\|1\|a, 4V4Q\|1\|AA, 4V4Q\|1\|CA, 4V7U\|1\|AA, 4V7T\|1\|CA, 4V7T\|1\|AA, 4V7S\|1\|CA, 4V7S\|1\|AA, 4V6C\|1\|CA, 4V6C\|1\|AA, 4V64\|1\|CA, 4V64\|1\|AA, 4V57\|1\|CA, 4V57\|1\|AA, 4V54\|1\|CA, 4V54\|1\|AA, 4V52\|1\|CA, 4V52\|1\|AA, 4V50\|1\|CA, 4V50\|1\|AA, 3JBV\|1\|A	(0)	(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	5IQR\|1\|2	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1522
2	4V9D\|1\|BA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
3	4V9C\|1\|AA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1539
4	4WOI\|1\|DA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
5	5AFI\|1\|a	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1528
6	3JCE\|1\|a	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	1533
7	4WOI\|1\|AA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
8	4V9C\|1\|CA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1538
9	4V9D\|1\|AA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
10	4V9O\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
11	4V9O\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
12	4WF1\|1\|CA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1539
13	4U1U\|1\|CA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
14	4U20\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
15	4U1V\|1\|CA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
16	4U27\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
17	4U25\|1\|CA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
18	4U26\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
19	4U24\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
20	4YBB\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1522
21	5J88\|1\|BA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1522
22	5IT8\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1522
23	5J91\|1\|BA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1522
24	5J5B\|1\|BA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1522
25	5J8A\|1\|BA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1522
26	5J7L\|1\|BA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1522
27	5JC9\|1\|BA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1522
28	4V7U\|1\|CA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1530
29	4V6C\|1\|CA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1530
30	4V7T\|1\|CA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1530
31	4V7V\|1\|CA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1530
32	4V7S\|1\|CA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1530
33	4WWW\|1\|XA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1530
34	4V57\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
35	4V52\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
36	4V54\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
37	4V4H\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
38	4V4Q\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
39	4V64\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
40	4V50\|1\|AA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
41	4V50\|1\|CA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
42	3JBV\|1\|A	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	1530
43	5J88\|1\|AA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1523
44	5JC9\|1\|AA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1523
45	5J7L\|1\|AA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1523
46	5J8A\|1\|AA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1523
47	5IT8\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1523
48	5J5B\|1\|AA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1523
49	5J91\|1\|AA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1523
50	4YBB\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1523
51	4U24\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
52	4U26\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
53	4U25\|1\|AA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
54	4U27\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
55	4U1U\|1\|AA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
56	4U20\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
57	4U1V\|1\|AA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
58	4WF1\|1\|AA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1538
59	4WWW\|1\|QA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1533
60	4V7S\|1\|AA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1533
61	4V6C\|1\|AA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1533
62	4V7T\|1\|AA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1533
63	4V7V\|1\|AA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1533
64	4V7U\|1\|AA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1533
65	4V9O\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
66	4V9P\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
67	4V9P\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
68	4V9O\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
69	4V9P\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
70	4V9P\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
71	4V57\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
72	4V64\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
73	4V52\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
74	4V54\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
75	4V4H\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
76	4V4Q\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
77	4V85\|1\|AA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	1532

Equivalence class NR_3.5_56726.15 Obsolete

Release history

Parents

Children