#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315342016-07-27
24YBB|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115342015-03-18
35J8A|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115342016-07-06
45JC9|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315342016-07-06
54WOI|1|DASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315392015-08-05
64WOI|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315382015-08-05
75IT8|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215342016-07-27
84V9P|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
94V9O|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
105J7L|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315332016-07-27
114V9P|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
124V9P|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
134V9P|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
145J8A|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115332016-07-06
154V9O|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
165J91|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615342016-07-06
174V6C|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915332014-07-09
185JC9|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315332016-07-06
194V52|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
204V9O|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
214V7T|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915332014-07-09
224V57|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
234WWW|1|QASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115332014-12-24
244V52|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
254V57|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
264U27|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815382014-07-30
275J88|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215342016-07-06
284V7V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915332014-07-09
294V54|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
304WF1|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915382014-11-05
314YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115332015-03-18
324U1U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515382014-07-30
334V64|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
344U26|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815382014-07-30
354V9D|1|AASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315382014-07-09
364U24|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915382014-07-30
374V7S|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515332014-07-09
384U25|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915382014-07-30
395IT8|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215332016-07-27
404V9D|1|BASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315392014-07-09
414V54|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
424U27|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815392014-07-30
434V64|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
444V7U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115332014-07-09
454V50|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
464V9O|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
474WWW|1|XASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115302014-12-24
484V4Q|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
494U20|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915382014-07-30
504U1U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515392014-07-30
514V50|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
524U1V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315382014-07-30
534U25|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915392014-07-30
544V6C|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915302014-07-09
555J88|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215332016-07-06
564V4Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
574U26|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815392014-07-30
584V85|1|AASmall subunit ribosomal RNA16S rRNARF00177Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.215322014-07-09
595J91|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615332016-07-06
604V7T|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915302014-07-09
614WF1|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915392014-11-05
624U24|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915392014-07-30
634U1V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315392014-07-30
644U20|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915392014-07-30
654V7S|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515302014-07-09
664V7V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915302014-07-09
674V9C|1|CASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315382014-07-09
684V9C|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315392014-07-09
694V7U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115302014-07-09
705J5B|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815342016-07-27
714V4H|1|CASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
724V4H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
735J5B|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815332016-07-27
745AFI|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF001772.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.915392015-03-11
755NWY|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF001772.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.915392017-07-19
763R8O|1|ASmall subunit ribosomal RNA16S rRNA, messenger RNARF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315392011-06-01
773R8N|1|ASmall subunit ribosomal RNA16S rRNA, messenger RNARF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315382011-06-01
785H5U|1|hSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0115342017-01-25
795WDT|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy315402018-04-25
805WFS|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy315402018-05-02
815MDV|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9715342016-12-14
825MGP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.115392016-12-14
836ENU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.115392017-11-22
845WE4|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.115402018-04-25
856ENF|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.215392017-11-22
865U9G|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.215392017-03-22
875U9F|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.215392017-03-22
883JCE|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.215332016-01-13
895UYM|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.215392017-06-07
905MDW|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0615342016-12-14
915MDZ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome (empty A site)Electron microscopy3.115342016-12-14
926C4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2415342018-02-21
934V80|1|AASmall subunit ribosomal RNA16S rRNARF00177Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.315332014-07-09
944V80|1|CASmall subunit ribosomal RNA16S rRNARF00177Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.315302014-07-09
955O2R|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.415392017-07-26
965WFK|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.415402018-05-02
975LZD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.415392016-11-23
985WE6|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.415392018-04-25
996BU8|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.515392018-01-31
1005LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xSmall subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00177 + RF01852 + RF00005Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.515282016-11-23
1015MDY|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3515342016-12-21
1025U4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.515332017-01-11
1035IQR|1|2Small subunit ribosomal RNASSU rRNAEscherichia coliBacteriaRF00177Structure of RelA bound to the 70S ribosomeElectron microscopy315332016-05-04
1043JBV|1|ASmall subunit ribosomal RNARNA (1530-MER)Escherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3215302016-01-27

Release history

Release3.363.37
Date2018-08-242018-08-31

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
24V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
34V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
44V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
54V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
64V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
74V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
84V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
94V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
104V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
114V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
124V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
134V80|1|AACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31533
144WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
154V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
164V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
174V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
184V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
195J88|1|AAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321534
205JC9|1|AAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031534
215J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31534
225J8A|1|AAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11534
235IT8|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121534
245J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81534
255J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961534
264YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11534
274U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
284U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
294U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
304U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
314U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
324U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
334U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
344WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
354V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
364V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
374V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
384V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
394V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
404WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
414V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
423R8N|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
434WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
444U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
454U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
464U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
474U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
484U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
494U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
504U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
514YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11533
525JC9|1|BAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031533
535J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31533
545J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81533
555J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961533
565J8A|1|BAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11533
575IT8|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121533
585J88|1|BAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321533
594V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
604V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
614V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
624V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
634V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
644V80|1|CACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31530
654WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
664V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
674V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
684V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
694V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
704V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
714V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
724V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
734V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
743JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
755H5U|1|hMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.011534
765NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
775MDY|1|2Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.351534
785MDW|1|2Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.061534
795MDZ|1|2Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.11534
805MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971534
816C4I|1|aConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.241534
825MGP|1|aStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.11539
836ENU|1|aPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.11539
846ENF|1|aCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.21539
855WFK|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.41540
865U9G|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.21539
875U9F|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.21539
885O2R|1|aCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.41539
895WE6|1|a70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.41539
905WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31540
915WE4|1|a70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.11540
925WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31540
935AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91539
945UYM|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.21539
956BU8|1|A70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.51539
965LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.51528
975LZD|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.41539
983JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
994WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
1004V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
1013R8O|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
1024V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
1035IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31533
1045U4I|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.51533

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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