NR_3.5_56726.52

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5J7L\|1\|AA (rep)	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
2	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
3	5J8A\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
4	5JC9\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
5	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
6	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
7	5IT8\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
8	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
9	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
10	5J7L\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
11	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
12	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
13	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
14	5J8A\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
15	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
16	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
17	6I7V\|1\|AA	Small subunit ribosomal RNA	16S ribosmal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
18	4V6C\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
19	5JC9\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
20	4V52\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
21	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
22	4V7T\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
23	4V57\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
24	4WWW\|1\|QA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
25	6LKQ\|1\|s	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-ray diffraction	3.1	2020-05-06
26	4V52\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
27	4V57\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
28	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
29	5J88\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
30	4V7V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
31	4V54\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
32	4WF1\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
33	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
34	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
35	4V64\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
36	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
37	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
38	6I7V\|1\|BA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
39	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
40	4V7S\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
41	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
42	5IT8\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
43	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
44	4V54\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
45	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
46	4V64\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
47	4V7U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
48	4V50\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
49	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
50	4WWW\|1\|XA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
51	4V4Q\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
52	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
53	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
54	4V50\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
55	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
56	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
57	4V6C\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
58	5J88\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
59	4V4Q\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
60	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
61	4V85\|1\|AA		16S rRNA				Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
62	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
63	4V7T\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
64	4WF1\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
65	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
66	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
67	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
68	4V7S\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
69	4V7V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
70	4V9C\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
71	4V9C\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
72	4V7U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
73	5J5B\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
74	4V4H\|1\|CA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
75	4V4H\|1\|AA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
76	5J5B\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
77	6TC3\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	2020-01-01
78	6TBV\|1\|16S1	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	2020-01-01
79	6Y69\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	2020-07-01
80	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
81	5NWY\|1\|0	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2017-07-19
82	3R8O\|1\|A		16S rRNA, messenger RNA				Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2011-06-01
83	6WD0\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2020-07-01
84	3R8N\|1\|A		16S rRNA, messenger RNA				Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2011-06-01
85	6H4N\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	2018-09-05
86	6WDE\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2020-07-01
87	6ORE\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Release complex 70S	Electron microscopy	2.9	2019-06-19
88	5H5U\|1\|h	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2017-01-25
89	5WDT\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
90	5WFS\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2018-05-02
91	6SZS\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	Electron microscopy	3.06	2019-12-04
92	5MDV\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
93	5MGP\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	2016-12-14
94	6ENU\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	Electron microscopy	3.1	2017-11-22
95	5WE4\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu wt complex with GppNHp	Electron microscopy	3.1	2018-04-25
96	6ENF\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	Electron microscopy	3.2	2017-11-22
97	5U9G\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, truncated mRNA	Escherichia coli	Bacteria	RF00177	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
98	6WNW\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	Electron microscopy	3.2	2020-06-24
99	5U9F\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, truncated mRNA	Escherichia coli	Bacteria	RF00177	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
100	6WDD\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	Electron microscopy	3.2	2020-07-01
101	3JCE\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
102	5UYM\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
103	5MDW\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2016-12-14
104	5MDZ\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2016-12-14
105	6C4I\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	Electron microscopy	3.24	2018-02-21
106	6WDG\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	Electron microscopy	3.3	2020-07-01
107	6WD1\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	Electron microscopy	3.3	2020-07-01
108	6WDF\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	Electron microscopy	3.3	2020-07-01
109	6OFX\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	Non-rotated ribosome (Structure I)	Electron microscopy	3.3	2019-09-25
110	6VWL\|1\|1	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	Electron microscopy	3.1	2020-06-03
111	4V80\|1\|AA		16S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
112	4V80\|1\|CA		16S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
113	6OG7\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	Electron microscopy	3.3	2019-09-25
114	5O2R\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	Electron microscopy	3.4	2017-07-26
115	6OGI\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	Electron microscopy	3.4	2019-09-25
116	5WFK\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	Electron microscopy	3.4	2018-05-02
117	5LZD\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
118	5WE6\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	Electron microscopy	3.4	2018-04-25
119	6WNV\|1\|3	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S ribosome without free 5S rRNA and with a perturbed PTC	Electron microscopy	3.5	2020-06-24
120	6BU8\|1\|A	Small subunit ribosomal RNA	16S ribosomal RNA, mRNA	Escherichia coli	Bacteria	RF00177	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	2018-01-31
121	5LZE\|1\|a+ 5LZE\|1\|y+ 5LZE\|1\|v+ 5LZE\|1\|x	Small subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA	16S ribosomal RNA, fMetSec-tRNASec, tRNAfMet, SECIS mRNA	Escherichia coli	Bacteria	RF00177 + RF01852 + RF00005	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2016-11-23
122	5MDY\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2016-12-21
123	5U4I\|1\|a	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
124	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
125	3JBV\|1\|A	Small subunit ribosomal RNA	RNA (1530-MER)	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
126	6OSQ\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	RF1 accommodated state bound Release complex 70S at long incubation time point	Electron microscopy	3.5	2019-06-26
127	6VWM\|1\|1	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	Electron microscopy	3.4	2020-06-03
128	6VWN\|1\|1	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	Electron microscopy	3.4	2020-06-03
129	6ORL\|1\|2	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	RF1 pre-accommodated 70S complex at 24 ms	Electron microscopy	3.5	2019-06-19

Release history

Release	3.133
Date	2020-07-01

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_56726.52	NR_3.5_56726.51	3.133	(122) 5J7L\|1\|BA, 6OGI\|1\|3, 4U25\|1\|CA, 4V9O\|1\|DA, 5MDZ\|1\|2, 4YBB\|1\|BA, 4V54\|1\|CA, 6C4I\|1\|a, 4U1U\|1\|AA, 4V7V\|1\|CA, 5J91\|1\|AA, 6TBV\|1\|16S1, 4V4H\|1\|AA, 4V9P\|1\|FA, 5U9F\|1\|A, 5IT8\|1\|AA, 4V6C\|1\|AA, 6I7V\|1\|BA, 4U20\|1\|AA, 4V9C\|1\|AA, 5LZD\|1\|a, 6VWN\|1\|1, 6WNV\|1\|3, 4V50\|1\|AA, 4WOI\|1\|AA, 5WE4\|1\|a, 4V7T\|1\|AA, 4U27\|1\|CA, 5U4I\|1\|a, 4V64\|1\|CA, 6I7V\|1\|AA, 4V7V\|1\|AA, 6SZS\|1\|a, 4V9P\|1\|DA, 4YBB\|1\|AA, 3R8O\|1\|A, 5J8A\|1\|BA, 4U25\|1\|AA, 5MDY\|1\|2, 4V54\|1\|AA, 6BU8\|1\|A, 4V9O\|1\|BA, 4V4Q\|1\|CA, 5WDT\|1\|a, 4V7S\|1\|CA, 6OG7\|1\|3, 4V85\|1\|AA, 6VWM\|1\|1, 4WF1\|1\|CA, 5J7L\|1\|AA, 5IQR\|1\|2, 4U1V\|1\|CA, 5JC9\|1\|BA, 4U27\|1\|AA, 5O2R\|1\|a, 4V64\|1\|AA, 6H4N\|1\|a, 4V7U\|1\|CA, 6OSQ\|1\|2, 4V9P\|1\|BA, 4WWW\|1\|XA, 3R8N\|1\|A, 5J8A\|1\|AA, 5MDW\|1\|2, 4V52\|1\|CA, 5WFS\|1\|a, 5J5B\|1\|BA, 4U24\|1\|CA, 4V4Q\|1\|AA, 5UYM\|1\|A, 4V7S\|1\|AA, 6OFX\|1\|3, 4V9D\|1\|BA, 4V80\|1\|CA, 6VWL\|1\|1, 4WF1\|1\|AA, 5H5U\|1\|h, 4U1V\|1\|AA, 5JC9\|1\|AA, 4U26\|1\|CA, 5NWY\|1\|0, 4V57\|1\|CA, 6ENU\|1\|a, 4V7U\|1\|AA, 6ORL\|1\|2, 4V9O\|1\|HA, 4WWW\|1\|QA, 3JCE\|1\|a, 5J88\|1\|BA, 4V9D\|1\|AA, 4V52\|1\|AA, 5WFK\|1\|a, 5J5B\|1\|AA, 4U24\|1\|AA, 5MDV\|1\|2, 4V4H\|1\|CA,	(7) 6WDG\|1\|3, 6WDF\|1\|3, 6WDE\|1\|3, 6WDD\|1\|3, 6WD1\|1\|3, 6WD0\|1\|3, 6Y69\|1\|a	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.5_56726.52	NR_3.5_56726.53	3.134	(129) 5AFI\|1\|a, 5LZD\|1\|a, 5LZE\|1\|a+5LZE\|1\|y+5LZE\|1\|v+5LZE\|1\|x, 5MDV\|1\|2, 5MDW\|1\|2, 5MDY\|1\|2, 5MDZ\|1\|2, 5MGP\|1\|a, 5NWY\|1\|0, 5O2R\|1\|a, 5U4I\|1\|a, 5U9F\|1\|A, 5U9G\|1\|A, 5UYM\|1\|A, 5WDT\|1\|a, 5JC9\|1\|BA, 5JC9\|1\|AA, 5H5U\|1\|h, 5IQR\|1\|2, 5IT8\|1\|AA, 5IT8\|1\|BA, 5J5B\|1\|AA, 5J5B\|1\|BA, 5J7L\|1\|AA, 5J7L\|1\|BA, 5J88\|1\|AA, 5J88\|1\|BA, 5J8A\|1\|AA, 5J8A\|1\|BA, 5J91\|1\|AA, 5J91\|1\|BA, 5WE4\|1\|a, 5WE6\|1\|a, 6SZS\|1\|a, 6TBV\|1\|16S1, 6TC3\|1\|16S1, 6VWL\|1\|1, 6VWM\|1\|1, 6VWN\|1\|1, 6WD0\|1\|3, 6WD1\|1\|3, 6WDD\|1\|3, 6WDE\|1\|3, 6WDF\|1\|3, 6WDG\|1\|3, 6WNV\|1\|3, 6WNW\|1\|3, 6OSQ\|1\|2, 6ORL\|1\|2, 5WFK\|1\|a, 5WFS\|1\|a, 6BU8\|1\|A, 6C4I\|1\|a, 6ENF\|1\|a, 6ENU\|1\|a, 6H4N\|1\|a, 6I7V\|1\|AA, 6I7V\|1\|BA, 6LKQ\|1\|s, 6OFX\|1\|3, 6OG7\|1\|3, 6OGI\|1\|3, 6ORE\|1\|2, 6Y69\|1\|a, 4YBB\|1\|BA, 3JBV\|1\|A, 4U27\|1\|CA, 4V4H\|1\|AA, 4V4H\|1\|CA, 4V4Q\|1\|AA, 4V4Q\|1\|CA, 4V50\|1\|AA, 4V50\|1\|CA, 4V52\|1\|AA, 4V52\|1\|CA, 4V54\|1\|AA, 4V54\|1\|CA, 4V57\|1\|AA, 4V57\|1\|CA, 4V64\|1\|AA, 4U27\|1\|AA, 4U26\|1\|CA, 3JCE\|1\|a, 3R8N\|1\|A, 3R8O\|1\|A, 4U1U\|1\|AA, 4U1U\|1\|CA, 4U1V\|1\|AA, 4U1V\|1\|CA, 4U20\|1\|AA, 4U20\|1\|CA, 4U24\|1\|AA, 4U24\|1\|CA, 4U25\|1\|AA, 4U25\|1\|CA	(0)	(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	6LKQ\|1\|s	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-RAY DIFFRACTION	3.1	1532
2	4V85\|1\|AA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	1532
3	4V4Q\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
4	4V4H\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
5	4V54\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
6	4V64\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
7	4V52\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
8	4V57\|1\|CA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
9	4V9P\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
10	4V9P\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
11	4V9O\|1\|HA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
12	4V7U\|1\|AA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1533
13	4V7V\|1\|AA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1533
14	4V7T\|1\|AA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1533
15	4V6C\|1\|AA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1533
16	4V7S\|1\|AA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1533
17	4V80\|1\|AA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	1533
18	4WWW\|1\|QA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1533
19	5J88\|1\|AA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1523
20	5JC9\|1\|AA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1523
21	5IT8\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1523
22	5J7L\|1\|AA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1523
23	5J8A\|1\|AA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1523
24	5J5B\|1\|AA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1523
25	5J91\|1\|AA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1523
26	4YBB\|1\|AA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1523
27	6I7V\|1\|AA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1522
28	4U24\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
29	4U26\|1\|AA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
30	4U25\|1\|AA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
31	4U27\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
32	4WF1\|1\|AA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1538
33	4U1U\|1\|AA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
34	4U20\|1\|AA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
35	4U1V\|1\|AA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
36	4V9P\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
37	4V9P\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
38	4V9O\|1\|DA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
39	4V9O\|1\|BA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
40	4V9O\|1\|FA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
41	5J88\|1\|BA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1522
42	5IT8\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	1522
43	5J5B\|1\|BA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	1522
44	5J91\|1\|BA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1522
45	5J8A\|1\|BA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1522
46	5J7L\|1\|BA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	1522
47	5JC9\|1\|BA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1522
48	4YBB\|1\|BA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1522
49	4U24\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
50	4U26\|1\|CA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
51	4U25\|1\|CA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
52	4U27\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
53	4U1V\|1\|CA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
54	4U20\|1\|CA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
55	4U1U\|1\|CA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
56	4WF1\|1\|CA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1539
57	6I7V\|1\|BA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	1533
58	4V80\|1\|CA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	1530
59	4WWW\|1\|XA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1530
60	4V7S\|1\|CA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1530
61	4V7V\|1\|CA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1530
62	4V7T\|1\|CA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1530
63	4V6C\|1\|CA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1530
64	4V7U\|1\|CA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1530
65	4V57\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
66	4V52\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
67	4V54\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
68	4V4Q\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
69	4V4H\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
70	4V64\|1\|AA	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
71	4V50\|1\|AA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
72	4V50\|1\|CA	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
73	4V9D\|1\|AA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
74	3R8N\|1\|A	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
75	6WDF\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	ELECTRON MICROSCOPY	3.3	1539
76	6WDG\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	ELECTRON MICROSCOPY	3.3	1539
77	6WD1\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	ELECTRON MICROSCOPY	3.3	1539
78	6WNV\|1\|3	70S ribosome without free 5S rRNA and with a perturbed PTC	ELECTRON MICROSCOPY	3.5	1539
79	5U9G\|1\|A	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	1539
80	5U9F\|1\|A	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	1539
81	5NWY\|1\|0	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	1539
82	6ORE\|1\|2	Release complex 70S	ELECTRON MICROSCOPY	2.9	1523
83	5MDY\|1\|2	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	1523
84	5MDW\|1\|2	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	1523
85	5MDZ\|1\|2	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	1523
86	5MDV\|1\|2	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	1523
87	6C4I\|1\|a	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	ELECTRON MICROSCOPY	3.24	1523
88	6OSQ\|1\|2	RF1 accommodated state bound Release complex 70S at long incubation time point	ELECTRON MICROSCOPY	3.5	1523
89	6WD0\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	1539
90	6H4N\|1\|a	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	1534
91	6Y69\|1\|a	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	1539
92	5MGP\|1\|a	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	1539
93	6SZS\|1\|a	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	ELECTRON MICROSCOPY	3.06	1540
94	6ENF\|1\|a	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	ELECTRON MICROSCOPY	3.2	1539
95	6ENU\|1\|a	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.1	1539
96	5WFK\|1\|a	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	ELECTRON MICROSCOPY	3.4	1531
97	6TC3\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	1523
98	6TBV\|1\|16S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	1523
99	5H5U\|1\|h	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	1534
100	6ORL\|1\|2	RF1 pre-accommodated 70S complex at 24 ms	ELECTRON MICROSCOPY	3.5	1523
101	5U4I\|1\|a	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	1523
102	5IQR\|1\|2	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1522
103	3R8O\|1\|A	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
104	4V9D\|1\|BA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
105	4V9C\|1\|AA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1539
106	4WOI\|1\|DA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
107	5O2R\|1\|a	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	ELECTRON MICROSCOPY	3.4	1539
108	5WFS\|1\|a	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	1529
109	5WDT\|1\|a	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	1529
110	5WE4\|1\|a	70S ribosome-EF-Tu wt complex with GppNHp	ELECTRON MICROSCOPY	3.1	1529
111	5WE6\|1\|a	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	ELECTRON MICROSCOPY	3.4	1528
112	5AFI\|1\|a	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1528
113	5UYM\|1\|A	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	1539
114	6WDD\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	ELECTRON MICROSCOPY	3.2	1539
115	6WDE\|1\|3	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	1539
116	6BU8\|1\|A	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	1539
117	5LZD\|1\|a	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	1528
118	5LZE\|1\|a+5LZE\|1\|y+5LZE\|1\|v+5LZE\|1\|x	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	1528
119	6WNW\|1\|3	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	ELECTRON MICROSCOPY	3.2	1539
120	6OG7\|1\|3	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	ELECTRON MICROSCOPY	3.3	1539
121	6OFX\|1\|3	Non-rotated ribosome (Structure I)	ELECTRON MICROSCOPY	3.3	1539
122	6VWM\|1\|1	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	ELECTRON MICROSCOPY	3.4	1508
123	6VWN\|1\|1	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	ELECTRON MICROSCOPY	3.4	1508
124	3JCE\|1\|a	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	1533
125	4V9C\|1\|CA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1538
126	4WOI\|1\|AA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
127	3JBV\|1\|A	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	1530
128	6VWL\|1\|1	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	ELECTRON MICROSCOPY	3.1	1521
129	6OGI\|1\|3	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	ELECTRON MICROSCOPY	3.4	1539

Equivalence class NR_3.5_56726.52 Obsolete

Release history

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