Equivalence class NR_3.5_60074.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7EZ2|1|N (rep) | Group I catalytic intron | Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2, Holo L-16 ScaI Tetrahymena ribozyme | Tetrahymena thermophila | Eukarya | RF00028 | Holo L-16 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.05 | 2021-08-25 |
| 2 | 7EZ0|1|N | Group I catalytic intron | Apo L-21 ScaI Tetrahymena ribozyme | Tetrahymena thermophila | Eukarya | RF00028 | Apo L-21 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.14 | 2021-08-25 |
| 3 | 7R6L|1|A | Group I catalytic intron | Group I intron, 5 prime fragment, Group I intron, 3 prime fragment plus 3 prime exon | Tetrahymena thermophila | Eukarya | RF00028 | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 2.85 | 2022-05-04 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_60074.1 | NR_3.5_98811.1 | 3.229 | (2) 7EZ2|1|N, 7EZ0|1|N | (1) 7R6L|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7EZ0|1|N | Apo L-21 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.14 | 387 |
| 2 | 7R6L|1|A | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 2.85 | 343 |
| 3 | 7EZ2|1|N | Holo L-16 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.05 | 392 |