Equivalence class NR_3.5_60347.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7RE3|1|T+ 7RE3|1|P (rep) | Template RNA, Product RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | Electron microscopy | 3.33 | 2021-11-24 | |||
| 2 | 7RE3|1|U+ 7RE3|1|Q | Template RNA, Product RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | Electron microscopy | 3.33 | 2021-11-24 | |||
| 3 | 7KRN|1|T+ 7KRN|1|P | RNA (43-MER), RNA (37-MER) | Severe acute respiratory syndrome coronavirus 2 | Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC | Electron microscopy | 3.4 | 2021-04-21 | |||
| 4 | 7RDX|1|T+ 7RDX|1|P | Template RNA, Product RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class | Electron microscopy | 3.1 | 2021-11-24 | |||
| 5 | 6XEZ|1|T+ 6XEZ|1|P | Template RNA, Product RNA | Severe acute respiratory syndrome-related coronavirus | Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC | Electron microscopy | 3.5 | 2020-07-29 |
Release history
| Release | 3.206 |
|---|---|
| Date | 2021-11-24 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_60347.1 | NR_3.5_18100.1 | 3.206 | (2) 7KRN|1|T+7KRN|1|P, 6XEZ|1|T+6XEZ|1|P | (3) 7RE3|1|U+7RE3|1|Q, 7RE3|1|T+7RE3|1|P, 7RDX|1|T+7RDX|1|P | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_60347.1 | NR_3.5_51758.1 | 3.207 | (5) 6XEZ|1|T+6XEZ|1|P, 7RE3|1|U+7RE3|1|Q, 7RE3|1|T+7RE3|1|P, 7RDX|1|T+7RDX|1|P, 7KRN|1|T+7KRN|1|P | (0) | (4) 7RE2|1|T+7RE2|1|P, 7RE1|1|T+7RE1|1|P, 7RE0|1|T+7RE0|1|P, 7RDY|1|T+7RDY|1|P |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6XEZ|1|T+6XEZ|1|P | Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC | ELECTRON MICROSCOPY | 3.5 | 36 |
| 2 | 7RDX|1|T+7RDX|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class | ELECTRON MICROSCOPY | 3.1 | 46 |
| 3 | 7RE3|1|T+7RE3|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | ELECTRON MICROSCOPY | 3.33 | 37 |
| 4 | 7RE3|1|U+7RE3|1|Q | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | ELECTRON MICROSCOPY | 3.33 | 37 |
| 5 | 7KRN|1|T+7KRN|1|P | Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC | ELECTRON MICROSCOPY | 3.4 | 43 |