Equivalence class NR_3.5_63260.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 165D|1|A+ 165D|1|B (rep) | DNA/RNA (5'-R(*GP*CP*UP*UP*CP*GP*GP*CP*)-D(*(BRU))-3') | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | X-ray diffraction | 1.55 | 1994-08-31 | ||||
| 2 | 1IDW|1|A+ 1IDW|1|B | 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UCL))-3' | STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[CL]U IN PRESENCE OF RH(NH3)6+++ | X-ray diffraction | 1.8 | 2001-04-12 | ||||
| 3 | 1IHA|1|A+ 1IHA|1|B | 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(BRU))-3' | Structure of the Hybrid RNA/DNA R-GCUUCGGC-D[BR]U in Presence of RH(NH3)6+++ | X-ray diffraction | 1.6 | 2001-05-07 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_63260.1 | NR_3.5_68798.1 | 2.124 | (1) 165D|1|A+165D|1|B | (2) 1IDW|1|A+1IDW|1|B, 1IHA|1|A+1IHA|1|B | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_63260.1 | NR_3.5_00122.1 | 2.132 | (1) 165D|1|A+165D|1|B | (2) 1IDW|1|A+1IDW|1|B, 1IHA|1|A+1IHA|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 165D|1|A+165D|1|B | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | X-RAY DIFFRACTION | 1.55 | 8 |
| 2 | 1IHA|1|A+1IHA|1|B | Structure of the Hybrid RNA/DNA R-GCUUCGGC-D[BR]U in Presence of RH(NH3)6+++ | X-RAY DIFFRACTION | 1.6 | 8 |
| 3 | 1IDW|1|A+1IDW|1|B | STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[CL]U IN PRESENCE OF RH(NH3)6+++ | X-RAY DIFFRACTION | 1.8 | 8 |