Equivalence class NR_3.5_66115.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6CB3|1|B (rep) | RNA (99-MER) | Lactococcus lactis | Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium | X-ray diffraction | 1.89 | 2018-06-13 | |||
| 2 | 6CB3|1|A | RNA (99-MER) | Lactococcus lactis | Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium | X-ray diffraction | 1.89 | 2018-06-13 | |||
| 3 | 6CC3|1|A | yybP-ykoY manganese riboswitch | RNA (101-MER) | Lactococcus lactis | Bacteria | RF00080 | Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium | X-ray diffraction | 2.7 | 2018-06-13 |
| 4 | 6CC3|1|B | yybP-ykoY manganese riboswitch | RNA (101-MER) | Lactococcus lactis | Bacteria | RF00080 | Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium | X-ray diffraction | 2.7 | 2018-06-13 |
| 5 | 6CC1|1|B | yybP-ykoY manganese riboswitch | RNA (94-MER) | Lactococcus lactis | Bacteria | RF00080 | Crystal structure of ykoY-alx riboswitch chimera bound to cadmium | X-ray diffraction | 2.54 | 2018-06-13 |
| 6 | 6CC1|1|A | yybP-ykoY manganese riboswitch | RNA (94-MER) | Lactococcus lactis | Bacteria | RF00080 | Crystal structure of ykoY-alx riboswitch chimera bound to cadmium | X-ray diffraction | 2.54 | 2018-06-13 |
Release history
| Release | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6CC1|1|B | Crystal structure of ykoY-alx riboswitch chimera bound to cadmium | X-RAY DIFFRACTION | 2.54 | 100 |
| 2 | 6CB3|1|B | Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium | X-RAY DIFFRACTION | 1.89 | 99 |
| 3 | 6CC1|1|A | Crystal structure of ykoY-alx riboswitch chimera bound to cadmium | X-RAY DIFFRACTION | 2.54 | 94 |
| 4 | 6CB3|1|A | Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium | X-RAY DIFFRACTION | 1.89 | 99 |
| 5 | 6CC3|1|A | Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium | X-RAY DIFFRACTION | 2.7 | 100 |
| 6 | 6CC3|1|B | Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium | X-RAY DIFFRACTION | 2.7 | 92 |