Equivalence class NR_3.5_71217.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ZMI|1|CC (rep) | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex | Electron microscopy | 2.6 | 2020-08-19 |
| 2 | 6ZM7|1|CC | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex | Electron microscopy | 2.7 | 2020-07-29 |
| 3 | 6ZVH|1|x | Transfer RNA | E-site tRNA | Homo sapiens | Eukarya | RF00005 | EDF1-ribosome complex | Electron microscopy | 2.9 | 2020-08-19 |
| 4 | 6Z6N|1|CC | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1) | Electron microscopy | 2.9 | 2020-07-29 |
| 5 | 6ZME|1|CC | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex | Electron microscopy | 3 | 2020-08-12 |
| 6 | 6Z6L|1|CC | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of human CCDC124 bound to 80S ribosomes | Electron microscopy | 3 | 2020-07-29 |
| 7 | 7OLD|1|5 | Transfer RNA | pe/E tRNA | Chaetomium thermophilum var. thermophilum DSM 1495 | Eukarya | RF00005 | Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state | Electron microscopy | 3 | 2022-01-26 |
| 8 | 6ZMO|1|CC | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex | Electron microscopy | 3.1 | 2020-08-19 |
Release history
| Release | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6ZVH|1|x | EDF1-ribosome complex | ELECTRON MICROSCOPY | 2.9 | 75 |
| 2 | 6ZMO|1|CC | SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex | ELECTRON MICROSCOPY | 3.1 | 75 |
| 3 | 6ZMI|1|CC | SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex | ELECTRON MICROSCOPY | 2.6 | 75 |
| 4 | 6ZM7|1|CC | SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex | ELECTRON MICROSCOPY | 2.7 | 75 |
| 5 | 6ZME|1|CC | SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex | ELECTRON MICROSCOPY | 3 | 75 |
| 6 | 6Z6L|1|CC | Cryo-EM structure of human CCDC124 bound to 80S ribosomes | ELECTRON MICROSCOPY | 3 | 75 |
| 7 | 6Z6N|1|CC | Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1) | ELECTRON MICROSCOPY | 2.9 | 75 |
| 8 | 7OLD|1|5 | Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state | ELECTRON MICROSCOPY | 3 | 75 |