Equivalence class NR_3.5_73286.9 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6QDV|1|5 (rep) | U5 spliceosomal RNA | U5 snRNA, Ligated exons: MINX mRNA | Homo sapiens | Eukarya | RF00020 | Human post-catalytic P complex spliceosome | Electron microscopy | 3.3 | 2019-02-20 |
| 2 | 6ICZ|1|B | U5 spliceosomal RNA | U5snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00020 | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | Electron microscopy | 3 | 2019-03-13 |
| 3 | 6FF4|1|5 | U5 spliceosomal RNA | U5 snRNA, U2 snRNA, pre mRNA | Homo sapiens | Eukarya | RF00020 | human Bact spliceosome core structure | Electron microscopy | 3.4 | 2018-08-29 |
| 4 | 6ID0|1|B | U5 spliceosomal RNA | U5snRNA | Homo sapiens | Eukarya | RF00020 | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | Electron microscopy | 2.9 | 2019-03-13 |
| 5 | 6ID1|1|B | U5 spliceosomal RNA | U5snRNA | Homo sapiens | Eukarya | RF00020 | Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution | Electron microscopy | 2.86 | 2019-03-13 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6ICZ|1|B | Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom | ELECTRON MICROSCOPY | 3 | 97 |
| 2 | 6ID1|1|B | Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution | ELECTRON MICROSCOPY | 2.86 | 98 |
| 3 | 6ID0|1|B | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | ELECTRON MICROSCOPY | 2.9 | 98 |
| 4 | 6QDV|1|5 | Human post-catalytic P complex spliceosome | ELECTRON MICROSCOPY | 3.3 | 75 |
| 5 | 6FF4|1|5 | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 3.4 | 70 |