NR_3.5_79924.1

Members (30)
History
Heat map

#	IFE	Molecule	Organism	Title	Method	Res. Å	Date
1	4OQ9\|1\|s (rep)	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
2	3I62\|1\|B	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structure of Mss116p bound to ssRNA and ADP-Aluminum Fluoride	X-ray diffraction	1.95	2009-09-08
3	3I61\|1\|B	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structure of Mss116p bound to ssRNA and ADP-Beryllium Fluoride	X-ray diffraction	2.1	2009-09-08
4	3I5X\|1\|B	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structure of Mss116p bound to ssRNA and AMP-PNP	X-ray diffraction	1.9	2009-09-08
5	4OQ9\|1\|f	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
6	4NIA\|1\|f	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
7	4OQ9\|1\|j	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
8	4NIA\|1\|j	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
9	4OQ9\|1\|k	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
10	4NIA\|1\|k	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
11	4OQ9\|1\|l	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
12	4NIA\|1\|l	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
13	4OQ9\|1\|o	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
14	4NIA\|1\|o	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
15	4NIA\|1\|p	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
16	4OQ9\|1\|p	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
17	4OQ9\|1\|q	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
18	4NIA\|1\|q	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
19	4OQ9\|1\|r	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-ray diffraction	1.45	2014-09-10
20	4NIA\|1\|r	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
21	4NIA\|1\|s	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')	Tobacco virtovirus 1	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-ray diffraction	1.82	2014-09-10
22	3I5Y\|1\|B	5'-R(UPUPUP(5BU)PUPUPUPUPUPU)-3'		Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP	X-ray diffraction	2.49	2009-09-08
23	3SQX\|1\|B	RNA (5'-R(UPUPUPUPUPUPUPUPUPU)-3')		Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP	X-ray diffraction	2.11	2011-10-12
24	3SQW\|1\|B	RNA (5'-R(PUPUPUPUPUPUPUPUPUPU)-3')		Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP	X-ray diffraction	1.91	2011-10-12
25	2DB3\|1\|E	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-ray diffraction	2.2	2006-05-02
26	2DB3\|1\|F	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-ray diffraction	2.2	2006-05-02
27	2DB3\|1\|G	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-ray diffraction	2.2	2006-05-02
28	3FHT\|1\|C	RNA (5'-R(UPUPUPUPUPUPUPUPUPU)-3')		Crystal structure of human Dbp5 in complex with AMPPNP and RNA	X-ray diffraction	2.2	2009-02-17
29	3FHT\|1\|D	RNA (5'-R(UPUPUPUPUPUPUPUPUPU)-3')		Crystal structure of human Dbp5 in complex with AMPPNP and RNA	X-ray diffraction	2.2	2009-02-17
30	2DB3\|1\|H	5'-R(UPUPUPUPUPUPUPUPUPU)-3'		Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-ray diffraction	2.2	2006-05-02

Release history

Release	2.0	2.1	2.2	2.3	2.4	2.5	2.6	2.7	2.8	2.9	2.10	2.11	2.12	2.13	2.14	2.15	2.16	2.17	2.18	2.19	2.20	2.21	2.22	2.23	2.24	2.25	2.26	2.27	2.28	2.29	2.30	2.31	2.32	2.33	2.34	2.35	2.36	2.37	2.38	2.39	2.40	2.41	2.42	2.43	2.44	2.45
Date	2014-12-05	2014-12-12	2014-12-19	2014-12-26	2015-01-02	2015-01-09	2015-01-16	2015-01-23	2015-01-30	2015-02-06	2015-02-13	2015-02-20	2015-02-27	2015-03-06	2015-03-13	2015-03-20	2015-03-27	2015-04-03	2015-04-10	2015-04-17	2015-04-24	2015-05-01	2015-05-08	2015-05-15	2015-05-22	2015-05-29	2015-06-05	2015-06-12	2015-06-19	2015-06-26	2015-07-03	2015-07-10	2015-07-17	2015-07-24	2015-07-31	2015-08-07	2015-08-14	2015-08-21	2015-08-28	2015-09-04	2015-09-11	2015-09-18	2015-09-25	2015-10-02	2015-10-09	2015-10-16

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	3I5Y\|1\|B	Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP	X-RAY DIFFRACTION	2.49	9
2	3I62\|1\|B	Structure of Mss116p bound to ssRNA and ADP-Aluminum Fluoride	X-RAY DIFFRACTION	1.95	10
3	3I61\|1\|B	Structure of Mss116p bound to ssRNA and ADP-Beryllium Fluoride	X-RAY DIFFRACTION	2.1	10
4	3I5X\|1\|B	Structure of Mss116p bound to ssRNA and AMP-PNP	X-RAY DIFFRACTION	1.9	10
5	4OQ9\|1\|k	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
6	4OQ9\|1\|f	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
7	4OQ9\|1\|o	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
8	4OQ9\|1\|r	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
9	4OQ9\|1\|l	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
10	4OQ9\|1\|j	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
11	4OQ9\|1\|p	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
12	4OQ9\|1\|q	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
13	4OQ9\|1\|s	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints	X-RAY DIFFRACTION	1.45	10
14	4NIA\|1\|p	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
15	4NIA\|1\|k	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
16	4NIA\|1\|j	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
17	4NIA\|1\|f	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
18	4NIA\|1\|l	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
19	4NIA\|1\|r	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
20	4NIA\|1\|s	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
21	4NIA\|1\|o	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
22	4NIA\|1\|q	Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS Restraints	X-RAY DIFFRACTION	1.82	10
23	3SQX\|1\|B	Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP	X-RAY DIFFRACTION	2.11	8
24	3SQW\|1\|B	Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP	X-RAY DIFFRACTION	1.91	8
25	2DB3\|1\|F	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-RAY DIFFRACTION	2.2	7
26	2DB3\|1\|G	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-RAY DIFFRACTION	2.2	7
27	2DB3\|1\|E	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-RAY DIFFRACTION	2.2	7
28	2DB3\|1\|H	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa	X-RAY DIFFRACTION	2.2	6
29	3FHT\|1\|D	Crystal structure of human Dbp5 in complex with AMPPNP and RNA	X-RAY DIFFRACTION	2.2	6
30	3FHT\|1\|C	Crystal structure of human Dbp5 in complex with AMPPNP and RNA	X-RAY DIFFRACTION	2.2	6

Equivalence class NR_3.5_79924.1 Obsolete

Release history

Parents

Children