NR_3.5_83717.80

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5J7L\|1\|DA (rep)	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2897	2016-07-27
2	5J8A\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2897	2016-07-06
3	5JC9\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2897	2016-07-06
4	4YBB\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2897	2015-03-18
5	5IT8\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2897	2016-07-27
6	4WOI\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2897	2015-08-05
7	4WOI\|1\|CA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2897	2015-08-05
8	6I7V\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2897	2018-12-05
9	5J91\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2897	2016-07-06
10	4V9P\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
11	5J88\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2897	2016-07-06
12	4V9P\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
13	4V9P\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
14	4V9P\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
15	6LKQ\|1\|t	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-ray diffraction	3.1	2850	2020-05-06
16	4V9D\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2897	2014-07-09
17	4V9O\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
18	4V9O\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
19	4WWW\|1\|RA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2854	2014-12-24
20	4V9O\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
21	4V6C\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2854	2014-07-09
22	5J7L\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2898	2016-07-27
23	4V7T\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2854	2014-07-09
24	4U27\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2897	2014-07-30
25	4WF1\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2897	2014-11-05
26	5J8A\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2898	2016-07-06
27	5JC9\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2898	2016-07-06
28	4V7U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2854	2014-07-09
29	4V7V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2854	2014-07-09
30	4V52\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2841	2014-07-09
31	4U24\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2897	2014-07-30
32	4U25\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2897	2014-07-30
33	4V9D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2896	2014-07-09
34	4U26\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2897	2014-07-30
35	4V7S\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2854	2014-07-09
36	4V57\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2841	2014-07-09
37	4V52\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2841	2014-07-09
38	4V57\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2841	2014-07-09
39	4V9O\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2854	2014-07-09
40	4U1U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2897	2014-07-30
41	4V85\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2853	2014-07-09
42	4V54\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2841	2014-07-09
43	4V64\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2841	2014-07-09
44	4V50\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2841	2014-07-09
45	4V54\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2841	2014-07-09
46	4V64\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2841	2014-07-09
47	4V50\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2841	2014-07-09
48	4YBB\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2898	2015-03-18
49	4U1V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2897	2014-07-30
50	5J88\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2898	2016-07-06
51	4V9C\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2897	2014-07-09
52	4U20\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2897	2014-07-30
53	6I7V\|1\|CA	Large subunit ribosomal RNA	23S ribsomal RNA	Escherichia coli	Bacteria	RF02541	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2898	2018-12-05
54	4U27\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2897	2014-07-30
55	4V4Q\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2841	2014-07-09
56	4V4Q\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2841	2014-07-09
57	4U25\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2897	2014-07-30
58	4U1U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2897	2014-07-30
59	4V9C\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2897	2014-07-09
60	4U1V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2897	2014-07-30
61	5IT8\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2898	2016-07-27
62	4WF1\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2897	2014-11-05
63	4U24\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2897	2014-07-30
64	4U26\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2897	2014-07-30
65	4U20\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2897	2014-07-30
66	4V6C\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2841	2014-07-09
67	5J91\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2898	2016-07-06
68	4WWW\|1\|YA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2841	2014-12-24
69	4V7T\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2841	2014-07-09
70	4V7V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2841	2014-07-09
71	4V7S\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2841	2014-07-09
72	4V7U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2841	2014-07-09
73	5J5B\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2897	2016-07-27
74	4V4H\|1\|DB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2841	2014-07-09
75	4V4H\|1\|BB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2841	2014-07-09
76	5J5B\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2898	2016-07-27
77	6HRM\|1\|1	Small subunit ribosomal RNA	stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA	Escherichia coli	Bacteria	RF02541	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	4450	2018-12-19
78	7K00\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	2753	2020-09-23
79	6XZ7\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	2897	2020-07-22
80	6PJ6\|1\|I	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	2898	2020-01-22
81	7N1P\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	2904	2021-07-14
82	7BL4\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	2897	2021-05-12
83	7N2U\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	2902	2021-07-14
84	7N2V\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	2904	2021-07-14
85	6YS3\|1\|b	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	2888	2020-09-30
86	6YSS\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	2903	2020-08-19
87	6PCR\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	2897	2020-06-17
88	6PC6\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	2897	2020-06-17
89	6PC7\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	2897	2020-06-17
90	7N30\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	2901	2021-07-14
91	6XZB\|1\|A2	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	2897	2020-11-04
92	7N31\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	2904	2021-07-14
93	6TBV\|1\|23S1	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	2897	2020-01-01
94	6TC3\|1\|23S1	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	2897	2020-01-01
95	6PCQ\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	2897	2020-06-17
96	7N2C\|1\|23	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	2903	2021-07-14
97	6XZA\|1\|A2	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	2897	2020-11-04
98	6QDW\|1\|b	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	2888	2020-01-15
99	6PC5\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	2897	2020-06-17
100	7NSO\|1\|A	Large subunit ribosomal RNA	23S rRNA (2903-MER)	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	2903	2021-07-14
101	5AFI\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2900	2015-03-11
102	7B5K\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli K-12	Bacteria	RF02541	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	2897	2021-05-26
103	6WYV\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	2897	2020-06-17
104	6PCT\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	2897	2020-06-17
105	6U48\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	2898	2019-09-18
106	6Y69\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	2887	2020-07-01
107	6PCS\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	2897	2020-06-17
108	6WNT\|1\|4	Large subunit ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF02541	50S ribosomal subunit without free 5S rRNA and perturbed PTC	Electron microscopy	3.1	3025	2020-06-24
109	5NWY\|1\|N	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2897	2017-07-19
110	6WD0\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2903	2020-07-01
111	6WDE\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2903	2020-07-01
112	5H5U\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2897	2017-01-25
113	6ORE\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Release complex 70S	Electron microscopy	2.9	2903	2019-06-19
114	6PC8\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	2897	2020-06-17
115	5MDV\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2903	2016-12-14
116	6H4N\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	2900	2018-09-05
117	7AC7\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	Electron microscopy	3.08	2903	2021-08-18
118	7NSQ\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	Electron microscopy	3.1	2903	2021-07-14
119	6WNW\|1\|4	Large subunit ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF02541	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	Electron microscopy	3.2	3031	2020-06-24
120	6ZU1\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	2900	2020-09-16
121	6ZTO\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	2900	2020-09-23
122	6ZTP\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	2900	2020-09-16
123	6PCH\|1\|I	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	2897	2020-06-17
124	6OM6\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA	Electron microscopy	3.1	2903	2021-02-10
125	6X7K\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.1	2880	2020-09-02
126	6YSR\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 stalled ribosome complex	Electron microscopy	3.1	2903	2020-08-19
127	5MDW\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2903	2016-12-14
128	6SZS\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	Electron microscopy	3.06	2903	2019-12-04
129	5MGP\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	2900	2016-12-14
130	7K54\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)	Electron microscopy	3.2	2903	2021-07-28
131	7K53\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)	Electron microscopy	3.2	2903	2021-07-28
132	7LV0\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)	Electron microscopy	3.2	2903	2021-07-28
133	5MDZ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2903	2016-12-14
134	6S0K\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA, tRNA-CCA	Escherichia coli	Bacteria	RF02541	Ribosome nascent chain in complex with SecA	Electron microscopy	3.1	2883	2019-10-09
135	5U9G\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2903	2017-03-22
136	5U9F\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2903	2017-03-22
137	6WDD\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	Electron microscopy	3.2	2903	2020-07-01
138	5UYM\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2903	2017-06-07
139	7ACJ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of translocated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.2	2903	2021-08-18
140	6ENU\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	Electron microscopy	3.1	2871	2017-11-22
141	6X6T\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.2	2880	2020-09-02
142	6YST\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	Electron microscopy	3.2	2903	2020-08-19
143	7ABZ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.21	2904	2021-08-18
144	6QUL\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-site fMet-tRNA(fMet)	Escherichia coli	Bacteria	RF02541	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	2795	2019-04-10
145	6VWL\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	Electron microscopy	3.1	2833	2020-06-03
146	5WFS\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2900	2018-05-02
147	7BL5\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli str. K-12 substr. MG1655	Bacteria	RF02541	pre-50S-ObgE particle	Electron microscopy	3.3	2913	2021-05-12
148	7K55\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)	Electron microscopy	3.3	2903	2021-07-28
149	7JT1\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)	Electron microscopy	3.3	2903	2020-11-11
150	6WDG\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	Electron microscopy	3.3	2903	2020-07-01
151	6WDF\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	Electron microscopy	3.3	2903	2020-07-01
152	6WD1\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	Electron microscopy	3.3	2903	2020-07-01
153	6OG7\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	Electron microscopy	3.3	2903	2019-09-25
154	5WE4\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu wt complex with GppNHp	Electron microscopy	3.1	2900	2018-04-25
155	6OFX\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Non-rotated ribosome (Structure I)	Electron microscopy	3.3	2903	2019-09-25
156	3JBV\|1\|b	Large subunit ribosomal RNA	RNA (2903-MER)	Escherichia coli	Bacteria	RF02541	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2903	2016-01-27
157	6C4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	Electron microscopy	3.24	2904	2018-02-21
158	5WDT\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2900	2018-04-25
159	7BV8\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mature 50S ribosomal subunit from RrmJ knock out E.coli strain	Electron microscopy	3.14	2897	2020-07-01
160	6ENF\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	Electron microscopy	3.2	2807	2017-11-22
161	7K50\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Pre-translocation non-frameshifting(CCA-A) complex (Structure I)	Electron microscopy	3.4	2903	2021-07-28
162	7K52\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)	Electron microscopy	3.4	2903	2021-07-28
163	6WNV\|1\|4	Large subunit ribosomal RNA	23s-5s joint ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome without free 5S rRNA and with a perturbed PTC	Electron microscopy	3.5	3025	2020-06-24
164	6OGI\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	Electron microscopy	3.4	2903	2019-09-25
165	5GAE\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCA end (5'-R(PCPCP*A)-3')	Escherichia coli	Bacteria	RF02541	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	2884	2016-01-27
166	3JCE\|1\|A	Large subunit ribosomal RNA	23 ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2903	2016-01-13
167	7ACR\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Structure of post-translocated trans-translation complex on E. coli stalled ribosome.	Electron microscopy	3.44	2903	2021-08-18
168	5MDY\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2903	2016-12-21
169	5LZD\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2903	2016-11-23
170	7D6Z\|1\|A	Large subunit ribosomal RNA	23S ribosomal rRNA	Escherichia coli	Bacteria	RF02541	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor	Electron microscopy	3.4	2903	2021-04-07
171	6ZTM\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in collided state without NusG	Electron microscopy	3.3	2901	2020-09-16
172	5WE6\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	Electron microscopy	3.4	2900	2018-04-25
173	6I0Y\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel	Electron microscopy	3.2	2854	2018-12-05
174	7NSP\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	Electron microscopy	3.5	2903	2021-08-11
175	7JT2\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	70S ribosome stalled on long mRNA with ArfB bound in the A site	Electron microscopy	3.5	2903	2020-11-11
176	7K51\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)	Electron microscopy	3.5	2903	2021-07-28
177	6X7F\|1\|a	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	Electron microscopy	3.5	2880	2020-09-02
178	6BU8\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	2903	2018-01-31
179	5WFK\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	Electron microscopy	3.4	2900	2018-05-02
180	5O2R\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	Electron microscopy	3.4	2900	2017-07-26
181	5LZE\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2900	2016-11-23
182	6ZTJ\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	Electron microscopy	3.4	2900	2020-09-16
183	5U4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2904	2017-01-11
184	6VWN\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	Electron microscopy	3.4	2833	2020-06-03
185	6VWM\|1\|2	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	Electron microscopy	3.4	2833	2020-06-03
186	5IQR\|1\|1	Large subunit ribosomal RNA	LSU rRNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2904	2016-05-04
187	6OSQ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	RF1 accommodated state bound Release complex 70S at long incubation time point	Electron microscopy	3.5	2903	2019-06-26
188	7BL3\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli K-12	Bacteria	RF02541	pre-50S-ObgE particle state 2	Electron microscopy	3.5	2902	2021-05-12
189	6ORL\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	RF1 pre-accommodated 70S complex at 24 ms	Electron microscopy	3.5	2903	2019-06-19
190	6ZTL\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-RNAP expressome complex in collided state bound to NusG	Electron microscopy	3.5	2899	2020-09-16
191	6C4H\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-site tRNA fMet	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	Electron microscopy	3.1	636	2018-02-21

Release history

Release	3.192	3.193
Date	2021-08-18	2021-08-25

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_83717.80	NR_3.5_83717.79	3.192	(187) 3JBV\|1\|b, 3JCE\|1\|A, 4U1U\|1\|BA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1V\|1\|DA, 4U20\|1\|BA, 4U20\|1\|DA, 4U24\|1\|BA, 4U24\|1\|DA, 4U25\|1\|BA, 4U25\|1\|DA, 4U26\|1\|BA, 4U26\|1\|DA, 4U27\|1\|BA, 4U27\|1\|DA, 4V4H\|1\|BB, 4V4H\|1\|DB, 4V4Q\|1\|BB, 4V4Q\|1\|DB, 4V50\|1\|BB, 4V50\|1\|DB, 4V52\|1\|BB, 4V52\|1\|DB, 4V54\|1\|BB, 4V54\|1\|DB, 4V57\|1\|BB, 4V57\|1\|DB, 4V64\|1\|BB, 4V64\|1\|DB, 4V6C\|1\|BA, 4V6C\|1\|DA, 4V7S\|1\|BA, 4V7S\|1\|DA, 4V7T\|1\|BA, 4V7T\|1\|DA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7V\|1\|DA, 4V85\|1\|BA, 4V9C\|1\|BA, 4V9C\|1\|DA, 4V9D\|1\|CA, 4V9D\|1\|DA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9O\|1\|EA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V9P\|1\|CA, 4V9P\|1\|EA, 4V9P\|1\|GA, 4WF1\|1\|BA, 4WF1\|1\|DA, 4WOI\|1\|BA, 4WOI\|1\|CA, 4WWW\|1\|RA, 4WWW\|1\|YA, 4YBB\|1\|CA, 4YBB\|1\|DA, 5AFI\|1\|A, 5GAE\|1\|A, 5H5U\|1\|A, 5IQR\|1\|1, 5IT8\|1\|CA, 5IT8\|1\|DA, 5J5B\|1\|CA, 5J5B\|1\|DA, 5J7L\|1\|CA, 5J7L\|1\|DA, 5J88\|1\|CA, 5J88\|1\|DA, 5J8A\|1\|CA, 5J8A\|1\|DA, 5J91\|1\|CA, 5J91\|1\|DA, 5JC9\|1\|CA, 5JC9\|1\|DA, 5LZD\|1\|A, 5LZE\|1\|A, 5MDV\|1\|1, 5MDW\|1\|1, 5MDY\|1\|1, 5MDZ\|1\|1, 5MGP\|1\|A, 5NWY\|1\|N, 5O2R\|1\|A, 5U4I\|1\|A, 5U9F\|1\|01, 5U9G\|1\|01, 5UYM\|1\|01, 5WDT\|1\|A, 5WE4\|1\|A, 5WE6\|1\|A, 5WFK\|1\|A, 5WFS\|1\|A, 6BU8\|1\|01, 6C4H\|1\|A, 6C4I\|1\|A, 6ENF\|1\|A, 6ENU\|1\|A, 6H4N\|1\|A, 6HRM\|1\|1, 6I0Y\|1\|A, 6I7V\|1\|CA, 6I7V\|1\|DA, 6LKQ\|1\|t, 6OFX\|1\|1, 6OG7\|1\|1, 6OGI\|1\|1, 6OM6\|1\|1, 6ORE\|1\|1, 6ORL\|1\|1, 6OSQ\|1\|1, 6PC5\|1\|I, 6PC6\|1\|I, 6PC7\|1\|I, 6PC8\|1\|I, 6PCH\|1\|I, 6PCQ\|1\|I, 6PCR\|1\|I, 6PCS\|1\|I, 6PCT\|1\|I, 6PJ6\|1\|I, 6QDW\|1\|b, 6QUL\|1\|A, 6S0K\|1\|A, 6SZS\|1\|A, 6TBV\|1\|23S1, 6TC3\|1\|23S1, 6U48\|1\|CA, 6VWL\|1\|2, 6VWM\|1\|2, 6VWN\|1\|2, 6WD0\|1\|1, 6WD1\|1\|1, 6WDD\|1\|1, 6WDE\|1\|1, 6WDF\|1\|1, 6WDG\|1\|1, 6WNT\|1\|4, 6WNV\|1\|4, 6WNW\|1\|4, 6WYV\|1\|I, 6X6T\|1\|a, 6X7F\|1\|a, 6X7K\|1\|a, 6XZ7\|1\|A, 6XZA\|1\|A2, 6XZB\|1\|A2, 6Y69\|1\|A, 6YS3\|1\|b, 6YSR\|1\|A, 6YSS\|1\|A, 6YST\|1\|A, 6ZTJ\|1\|BA, 6ZTL\|1\|BA, 6ZTM\|1\|BA, 6ZTO\|1\|BA, 6ZTP\|1\|BA, 6ZU1\|1\|BA, 7B5K\|1\|A, 7BL3\|1\|A, 7BL4\|1\|A, 7BL5\|1\|A, 7BV8\|1\|A, 7D6Z\|1\|A, 7JT1\|1\|1, 7JT2\|1\|1, 7K00\|1\|a, 7K50\|1\|1, 7K51\|1\|1, 7K52\|1\|1, 7K53\|1\|1, 7K54\|1\|1, 7K55\|1\|1, 7LV0\|1\|1, 7N1P\|1\|23, 7N2C\|1\|23, 7N2U\|1\|23, 7N2V\|1\|23, 7N30\|1\|23, 7N31\|1\|23, 7NSO\|1\|A, 7NSP\|1\|A, 7NSQ\|1\|A	(4) 7ABZ\|1\|1, 7AC7\|1\|1, 7ACJ\|1\|1, 7ACR\|1\|1	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.5_83717.80	NR_3.5_83717.81	3.194	(191) 3JBV\|1\|b, 3JCE\|1\|A, 4U1U\|1\|BA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1V\|1\|DA, 4U20\|1\|BA, 4U20\|1\|DA, 4U24\|1\|BA, 4U24\|1\|DA, 4U25\|1\|BA, 4U25\|1\|DA, 4U26\|1\|BA, 4U26\|1\|DA, 4U27\|1\|BA, 4U27\|1\|DA, 4V4H\|1\|BB, 4V4H\|1\|DB, 4V4Q\|1\|BB, 4V4Q\|1\|DB, 4V50\|1\|BB, 4V50\|1\|DB, 4V52\|1\|BB, 4V52\|1\|DB, 4V54\|1\|BB, 4V54\|1\|DB, 4V57\|1\|BB, 4V57\|1\|DB, 4V64\|1\|BB, 4V64\|1\|DB, 4V6C\|1\|BA, 4V6C\|1\|DA, 4V7S\|1\|BA, 4V7S\|1\|DA, 4V7T\|1\|BA, 4V7T\|1\|DA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7V\|1\|DA, 4V85\|1\|BA, 4V9C\|1\|BA, 4V9C\|1\|DA, 4V9D\|1\|CA, 4V9D\|1\|DA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9O\|1\|EA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V9P\|1\|CA, 4V9P\|1\|EA, 4V9P\|1\|GA, 4WF1\|1\|BA, 4WF1\|1\|DA, 4WOI\|1\|BA, 4WOI\|1\|CA, 4WWW\|1\|RA, 4WWW\|1\|YA, 4YBB\|1\|CA, 4YBB\|1\|DA, 5AFI\|1\|A, 5GAE\|1\|A, 5H5U\|1\|A, 5IQR\|1\|1, 5IT8\|1\|CA, 5IT8\|1\|DA, 5J5B\|1\|CA, 5J5B\|1\|DA, 5J7L\|1\|CA, 5J7L\|1\|DA, 5J88\|1\|CA, 5J88\|1\|DA, 5J8A\|1\|CA, 5J8A\|1\|DA, 5J91\|1\|CA, 5J91\|1\|DA, 5JC9\|1\|CA, 5JC9\|1\|DA, 5LZD\|1\|A, 5LZE\|1\|A, 5MDV\|1\|1, 5MDW\|1\|1, 5MDY\|1\|1, 5MDZ\|1\|1, 5MGP\|1\|A, 5NWY\|1\|N, 5O2R\|1\|A, 5U4I\|1\|A, 5U9F\|1\|01, 5U9G\|1\|01, 5UYM\|1\|01, 5WDT\|1\|A, 5WE4\|1\|A, 5WE6\|1\|A, 5WFK\|1\|A, 5WFS\|1\|A, 6BU8\|1\|01, 6C4H\|1\|A, 6C4I\|1\|A, 6ENF\|1\|A, 6ENU\|1\|A, 6H4N\|1\|A, 6HRM\|1\|1, 6I0Y\|1\|A, 6I7V\|1\|CA, 6I7V\|1\|DA, 6LKQ\|1\|t, 6OFX\|1\|1, 6OG7\|1\|1, 6OGI\|1\|1, 6OM6\|1\|1, 6ORE\|1\|1, 6ORL\|1\|1, 6OSQ\|1\|1, 6PC5\|1\|I, 6PC6\|1\|I, 6PC7\|1\|I, 6PC8\|1\|I, 6PCH\|1\|I, 6PCQ\|1\|I, 6PCR\|1\|I, 6PCS\|1\|I, 6PCT\|1\|I, 6PJ6\|1\|I, 6QDW\|1\|b, 6QUL\|1\|A, 6S0K\|1\|A, 6SZS\|1\|A, 6TBV\|1\|23S1, 6TC3\|1\|23S1, 6U48\|1\|CA, 6VWL\|1\|2, 6VWM\|1\|2, 6VWN\|1\|2, 6WD0\|1\|1, 6WD1\|1\|1, 6WDD\|1\|1, 6WDE\|1\|1, 6WDF\|1\|1, 6WDG\|1\|1, 6WNT\|1\|4, 6WNV\|1\|4, 6WNW\|1\|4, 6WYV\|1\|I, 6X6T\|1\|a, 6X7F\|1\|a, 6X7K\|1\|a, 6XZ7\|1\|A, 6XZA\|1\|A2, 6XZB\|1\|A2, 6Y69\|1\|A, 6YS3\|1\|b, 6YSR\|1\|A, 6YSS\|1\|A, 6YST\|1\|A, 6ZTJ\|1\|BA, 6ZTL\|1\|BA, 6ZTM\|1\|BA, 6ZTO\|1\|BA, 6ZTP\|1\|BA, 6ZU1\|1\|BA, 7ABZ\|1\|1, 7AC7\|1\|1, 7ACJ\|1\|1, 7ACR\|1\|1, 7B5K\|1\|A, 7BL3\|1\|A, 7BL4\|1\|A, 7BL5\|1\|A, 7BV8\|1\|A, 7D6Z\|1\|A, 7JT1\|1\|1, 7JT2\|1\|1, 7K00\|1\|a, 7K50\|1\|1, 7K51\|1\|1, 7K52\|1\|1, 7K53\|1\|1, 7K54\|1\|1, 7K55\|1\|1, 7LV0\|1\|1, 7N1P\|1\|23, 7N2C\|1\|23, 7N2U\|1\|23, 7N2V\|1\|23, 7N30\|1\|23, 7N31\|1\|23, 7NSO\|1\|A, 7NSP\|1\|A, 7NSQ\|1\|A	(0)	(3) 7O19\|1\|BA, 7O1A\|1\|BA, 7O1C\|1\|BA

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	6HRM\|1\|1	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	4450
2	6C4H\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	ELECTRON MICROSCOPY	3.1	636
3	6C4I\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	ELECTRON MICROSCOPY	3.24	2904
4	5MDV\|1\|1	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	2903
5	6YSR\|1\|A	Structure of the P+9 stalled ribosome complex	ELECTRON MICROSCOPY	3.1	2903
6	6YSS\|1\|A	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	2903
7	6YS3\|1\|b	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	2888
8	6QDW\|1\|b	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	2888
9	4V7U\|1\|BA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2854
10	4V7T\|1\|BA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2854
11	4V6C\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2854
12	4WWW\|1\|RA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2854
13	4V7S\|1\|BA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2854
14	4V7V\|1\|BA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2854
15	6I7V\|1\|DA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	2897
16	4YBB\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2897
17	5J5B\|1\|DA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2897
18	5J91\|1\|DA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2897
19	5J8A\|1\|DA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2897
20	5J7L\|1\|DA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2897
21	5JC9\|1\|DA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2897
22	5IT8\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2897
23	5J88\|1\|DA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2897
24	6XZA\|1\|A2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	2897
25	6XZB\|1\|A2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	2897
26	6XZ7\|1\|A	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	2897
27	4V50\|1\|DB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
28	4V57\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
29	4V52\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
30	4V64\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
31	4V54\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
32	4V4H\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
33	4V4Q\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
34	4WWW\|1\|YA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2841
35	4V7S\|1\|DA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2841
36	4V7V\|1\|DA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2841
37	4V7T\|1\|DA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2841
38	4V6C\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2841
39	4V7U\|1\|DA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2841
40	4WOI\|1\|CA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
41	4V9C\|1\|BA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
42	4V9D\|1\|DA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2896
43	4U1U\|1\|DA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
44	4U20\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
45	4U1V\|1\|DA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
46	4WF1\|1\|DA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
47	4U27\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
48	4U25\|1\|DA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
49	4U26\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
50	4U24\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
51	6I7V\|1\|CA	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	2898
52	4YBB\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2898
53	5J88\|1\|CA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2898
54	5IT8\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2898
55	5J91\|1\|CA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2898
56	5J5B\|1\|CA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2898
57	5J8A\|1\|CA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2898
58	5J7L\|1\|CA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2898
59	5JC9\|1\|CA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2898
60	6U48\|1\|CA	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	2898
61	6PJ6\|1\|I	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	2898
62	6PCH\|1\|I	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	2897
63	6PCS\|1\|I	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	2897
64	6PC6\|1\|I	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	2897
65	6PC5\|1\|I	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	2897
66	6PCR\|1\|I	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	2897
67	6PCQ\|1\|I	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	2897
68	6PC7\|1\|I	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	2897
69	6PC8\|1\|I	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	2897
70	6PCT\|1\|I	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	2897
71	6WYV\|1\|I	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	2897
72	7NSP\|1\|A	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	ELECTRON MICROSCOPY	3.5	2903
73	7NSQ\|1\|A	Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA	ELECTRON MICROSCOPY	3.1	2903
74	7N1P\|1\|23	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	2904
75	7BV8\|1\|A	Mature 50S ribosomal subunit from RrmJ knock out E.coli strain	ELECTRON MICROSCOPY	3.14	2897
76	7BL4\|1\|A	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	2897
77	7BL3\|1\|A	pre-50S-ObgE particle state 2	ELECTRON MICROSCOPY	3.5	2902
78	6WNT\|1\|4	50S ribosomal subunit without free 5S rRNA and perturbed PTC	ELECTRON MICROSCOPY	3.1	3025
79	6WNV\|1\|4	70S ribosome without free 5S rRNA and with a perturbed PTC	ELECTRON MICROSCOPY	3.5	3025
80	7ACR\|1\|1	Structure of post-translocated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.44	2903
81	7ACJ\|1\|1	Structure of translocated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.2	2903
82	6LKQ\|1\|t	The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin	X-RAY DIFFRACTION	3.1	2850
83	4V85\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	2853
84	4V9P\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
85	4V9O\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
86	6I0Y\|1\|A	TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel	ELECTRON MICROSCOPY	3.2	2854
87	4V9O\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
88	4V9P\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
89	4V9P\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
90	4V9O\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
91	4V9O\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
92	4V9P\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
93	4V50\|1\|BB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
94	4V4Q\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
95	4V4H\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
96	4V52\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
97	4V57\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
98	4V64\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
99	4V54\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
100	7ABZ\|1\|1	Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.	ELECTRON MICROSCOPY	3.21	2904
101	5MDY\|1\|1	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	2903
102	6S0K\|1\|A	Ribosome nascent chain in complex with SecA	ELECTRON MICROSCOPY	3.1	2883
103	6QUL\|1\|A	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	2795
104	6ZTJ\|1\|BA	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)	ELECTRON MICROSCOPY	3.4	2900
105	6ZTL\|1\|BA	E. coli 70S-RNAP expressome complex in collided state bound to NusG	ELECTRON MICROSCOPY	3.5	2899
106	6ZTO\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	2900
107	6ZTP\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	2900
108	6ZU1\|1\|BA	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	2900
109	7K00\|1\|a	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	2753
110	6ZTM\|1\|BA	E. coli 70S-RNAP expressome complex in collided state without NusG	ELECTRON MICROSCOPY	3.3	2901
111	7AC7\|1\|1	Structure of accomodated trans-translation complex on E. Coli stalled ribosome.	ELECTRON MICROSCOPY	3.08	2903
112	7JT2\|1\|1	70S ribosome stalled on long mRNA with ArfB bound in the A site	ELECTRON MICROSCOPY	3.5	2903
113	7JT1\|1\|1	70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)	ELECTRON MICROSCOPY	3.3	2903
114	5LZD\|1\|A	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	2903
115	5LZE\|1\|A	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	2900
116	6WNW\|1\|4	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA	ELECTRON MICROSCOPY	3.2	3031
117	5U9G\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	2903
118	5U9F\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	2903
119	6BU8\|1\|01	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	2903
120	6WDD\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)	ELECTRON MICROSCOPY	3.2	2903
121	6WDE\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	2903
122	6WD0\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	2903
123	7K51\|1\|1	Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)	ELECTRON MICROSCOPY	3.5	2903
124	7K54\|1\|1	Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)	ELECTRON MICROSCOPY	3.2	2903
125	7K52\|1\|1	Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)	ELECTRON MICROSCOPY	3.4	2903
126	7K55\|1\|1	Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)	ELECTRON MICROSCOPY	3.3	2903
127	7K53\|1\|1	Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)	ELECTRON MICROSCOPY	3.2	2903
128	7K50\|1\|1	Pre-translocation non-frameshifting(CCA-A) complex (Structure I)	ELECTRON MICROSCOPY	3.4	2903
129	6H4N\|1\|A	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	2900
130	6Y69\|1\|A	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	2887
131	5MGP\|1\|A	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	2900
132	5UYM\|1\|01	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	2903
133	5AFI\|1\|A	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	2900
134	5O2R\|1\|A	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	ELECTRON MICROSCOPY	3.4	2900
135	5WFS\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	2900
136	5WE4\|1\|A	70S ribosome-EF-Tu wt complex with GppNHp	ELECTRON MICROSCOPY	3.1	2900
137	5WDT\|1\|A	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	2900
138	5WFK\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)	ELECTRON MICROSCOPY	3.4	2900
139	5WE6\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	ELECTRON MICROSCOPY	3.4	2900
140	7NSO\|1\|A	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	2903
141	6SZS\|1\|A	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis	ELECTRON MICROSCOPY	3.06	2903
142	6OM6\|1\|1	Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA	ELECTRON MICROSCOPY	3.1	2903
143	5MDW\|1\|1	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	2903
144	5MDZ\|1\|1	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	2903
145	6X7K\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.1	2880
146	6X7F\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.5	2880
147	6X6T\|1\|a	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site	ELECTRON MICROSCOPY	3.2	2880
148	6ORE\|1\|1	Release complex 70S	ELECTRON MICROSCOPY	2.9	2903
149	6OSQ\|1\|1	RF1 accommodated state bound Release complex 70S at long incubation time point	ELECTRON MICROSCOPY	3.5	2903
150	5NWY\|1\|N	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	2897
151	6ORL\|1\|1	RF1 pre-accommodated 70S complex at 24 ms	ELECTRON MICROSCOPY	3.5	2903
152	5U4I\|1\|A	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	2904
153	5IQR\|1\|1	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	2904
154	7N31\|1\|23	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	2904
155	7B5K\|1\|A	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	2897
156	6TC3\|1\|23S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	2897
157	6TBV\|1\|23S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	2897
158	7D6Z\|1\|A	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor	ELECTRON MICROSCOPY	3.4	2903
159	5H5U\|1\|A	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	2897
160	3JCE\|1\|A	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	2903
161	5GAE\|1\|A	RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	2884
162	6VWN\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)	ELECTRON MICROSCOPY	3.4	2833
163	6VWM\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)	ELECTRON MICROSCOPY	3.4	2833
164	6OG7\|1\|1	70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)	ELECTRON MICROSCOPY	3.3	2903
165	6OFX\|1\|1	Non-rotated ribosome (Structure I)	ELECTRON MICROSCOPY	3.3	2903
166	6OGI\|1\|1	70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)	ELECTRON MICROSCOPY	3.4	2903
167	6YST\|1\|A	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state	ELECTRON MICROSCOPY	3.2	2903
168	7N2C\|1\|23	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	2903
169	7N2V\|1\|23	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	2904
170	7N2U\|1\|23	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	2902
171	6VWL\|1\|2	70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)	ELECTRON MICROSCOPY	3.1	2833
172	7LV0\|1\|1	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)	ELECTRON MICROSCOPY	3.2	2903
173	6WD1\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)	ELECTRON MICROSCOPY	3.3	2903
174	6WDG\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)	ELECTRON MICROSCOPY	3.3	2903
175	6WDF\|1\|1	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)	ELECTRON MICROSCOPY	3.3	2903
176	7N30\|1\|23	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	2901
177	4V9D\|1\|CA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2897
178	4U1U\|1\|BA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
179	4U20\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
180	4U1V\|1\|BA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
181	4WF1\|1\|BA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
182	4U27\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
183	4U25\|1\|BA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
184	4U24\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
185	4U26\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
186	4V9C\|1\|DA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
187	4WOI\|1\|BA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
188	6ENU\|1\|A	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.1	2871
189	6ENF\|1\|A	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	ELECTRON MICROSCOPY	3.2	2807
190	3JBV\|1\|b	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	2903
191	7BL5\|1\|A	pre-50S-ObgE particle	ELECTRON MICROSCOPY	3.3	2913

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_83717.80 Obsolete

Release history

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