Equivalence class NR_3.5_87525.4 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 8B2L|1|h1 (rep) | Small subunit ribosomal RNA | 18S rRNA | Nicotiana tabacum | Eukarya | RF01960 | Cryo-EM structure of the plant 80S ribosome | Electron microscopy | 2.2 | 2023-08-23 |
2 | 8AUV|1|h | Small subunit ribosomal RNA | 18S rRNA | Nicotiana tabacum | Eukarya | RF01960 | Cryo-EM structure of the plant 40S subunit | Electron microscopy | 2.38 | 2023-06-07 |
3 | 7QIZ|1|S2 | Small subunit ribosomal RNA | 18S | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant 80S ribosome | Electron microscopy | 2.38 | 2022-08-03 |
4 | 7QIX|1|2 | Small subunit ribosomal RNA | 18S rRNA body | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | Electron microscopy | 2.53 | 2022-06-15 |
Release history
Parents
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 8B2L|1|h1 | Cryo-EM structure of the plant 80S ribosome | ELECTRON MICROSCOPY | 2.2 | 1545 |
2 | 8AUV|1|h | Cryo-EM structure of the plant 40S subunit | ELECTRON MICROSCOPY | 2.38 | 1545 |
3 | 7QIZ|1|S2 | Specific features and methylation sites of a plant 80S ribosome | ELECTRON MICROSCOPY | 2.38 | 1507 |
4 | 7QIX|1|2 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | ELECTRON MICROSCOPY | 2.53 | 1060 |