Equivalence class NR_3.5_88402.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7LS2|1|A2+ 7LS2|1|C2 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S rRNA | Mus musculus | Eukarya | RF02543 + RF00002 | 80S ribosome from mouse bound to eEF2 (Class I) | Electron microscopy | 3.1 | 2021-11-03 |
| 2 | 6SWA|1|q+ 6SWA|1|r | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA (3612-MER), 5.8S ribosomal RNA (157-MER) | Mus musculus | Eukarya | RF02543 + RF00002 | Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1 | Electron microscopy | 3.1 | 2020-09-30 |
| 3 | 7LS1|1|A2+ 7LS1|1|C2 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S rRNA | Mus musculus | Eukarya | RF02543 + RF00002 | 80S ribosome from mouse bound to eEF2 (Class II) | Electron microscopy | 3.3 | 2021-11-03 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_88402.1 | NR_3.5_38048.1 | 3.203 | (1) 6SWA|1|q+6SWA|1|r | (2) 7LS1|1|A2+7LS1|1|C2, 7LS2|1|A2+7LS2|1|C2 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_88402.1 | NR_3.5_96091.1 | 3.216 | (3) 7LS2|1|A2+7LS2|1|C2, 7LS1|1|A2+7LS1|1|C2, 6SWA|1|q+6SWA|1|r | (0) | (2) 7CPV|1|L5+7CPV|1|L8, 7CPU|1|L5+7CPU|1|L8 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7LS1|1|A2+7LS1|1|C2 | 80S ribosome from mouse bound to eEF2 (Class II) | ELECTRON MICROSCOPY | 3.3 | 3626 |
| 2 | 7LS2|1|A2+7LS2|1|C2 | 80S ribosome from mouse bound to eEF2 (Class I) | ELECTRON MICROSCOPY | 3.1 | 3625 |
| 3 | 6SWA|1|q+6SWA|1|r | Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1 | ELECTRON MICROSCOPY | 3.1 | 3612 |