Equivalence class NR_3.5_88517.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNG|1|L (rep) | RNA (42-MER) | Schmallenberg virus nucleoprotein-RNA complex | X-ray diffraction | 2.12 | 2013-07-31 | ||||
| 2 | 5UK4|1|x | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 3 | 5UK4|1|v | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 4 | 5UK4|1|w | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 5 | 5UK4|1|u | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 6 | 4BHH|1|R | POLY-URIDINE 45-MER | synthetic construct | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-ray diffraction | 3.4 | 2013-04-24 | |||
| 7 | 4J1G|1|E | RNA (45-MER) | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-ray diffraction | 2.79 | 2013-04-10 | ||||
| 8 | 3ZLA|1|I | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 9 | 3ZLA|1|J | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 10 | 3PU4|1|R | RNA (45-MER) | synthetic construct | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-ray diffraction | 3 | 2011-01-12 | |||
| 11 | 2GIC|1|R | 45-MER | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-ray diffraction | 2.92 | 2006-08-22 | ||||
| 12 | 3HHZ|1|R | RNA (45-MER) | Escherichia coli | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-ray diffraction | 3.5 | 2009-07-28 | |||
| 13 | 6BJY|1|R | RNA (45-MER) | Indiana vesiculovirus | VSV Nucleocapsid with Polyamide Bound | X-ray diffraction | 3.46 | 2018-02-28 |
Release history
| Release | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 | 2019-02-01 | 2019-02-08 | 2019-02-15 | 2019-02-22 | 2019-03-01 | 2019-03-08 | 2019-03-15 | 2019-03-22 | 2019-03-29 | 2019-04-05 | 2019-04-12 | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 |
Parents
Children
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5UK4|1|u | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 2 | 5UK4|1|v | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 3 | 5UK4|1|w | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 4 | 5UK4|1|x | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 5 | 3PU4|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-RAY DIFFRACTION | 3 | 45 |
| 6 | 3HHZ|1|R | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-RAY DIFFRACTION | 3.5 | 45 |
| 7 | 2GIC|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-RAY DIFFRACTION | 2.92 | 45 |
| 8 | 6BJY|1|R | VSV Nucleocapsid with Polyamide Bound | X-RAY DIFFRACTION | 3.46 | 45 |
| 9 | 4JNG|1|L | Schmallenberg virus nucleoprotein-RNA complex | X-RAY DIFFRACTION | 2.12 | 42 |
| 10 | 3ZLA|1|J | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 11 | 3ZLA|1|I | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 12 | 4J1G|1|E | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-RAY DIFFRACTION | 2.79 | 45 |
| 13 | 4BHH|1|R | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-RAY DIFFRACTION | 3.4 | 44 |