#IFECompound(s)RNA source organismTitleMethodResolutionDate
14AFY|1|D (rep)5'-R(*GP*GP)-3'synthetic constructCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012013-01-09
24AFY|1|C5'-R(*GP*GP)-3'synthetic constructCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012013-01-09
35UEF|1|CRNA (5'-R(P*GP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12017-07-05
43U2E|1|CRNA (5'-R(P*GP*G)-3')EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322011-10-12
55UEF|1|DRNA (5'-R(P*GP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12017-07-05
63U2E|1|DRNA (5'-R(P*GP*G)-3')EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322011-10-12
74X4U|1|HRNA (5'-D(*GP*G)-3')Homo sapiensCrystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACCX-RAY DIFFRACTION2.72015-02-11
84LQ3|1|R5'-R(P*GP*G)-3'Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDSX-RAY DIFFRACTION2.62014-02-12
91UVK|1|B5'-D(*GP*GP)-3'The structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.452004-02-19
101UVK|1|D5'-D(*GP*GP)-3'The structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.452004-02-19
111UVK|1|F5'-D(*GP*GP)-3'The structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.452004-02-19

Release history

Release2.136
Date2017-07-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_89612.2NR_3.5_89612.12.136(9) 4X4U|1|H, 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|D, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B(2) 5UEF|1|D, 5UEF|1|C(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_89612.2NR_3.5_89612.32.137(8) 4AFY|1|D, 3U2E|1|D, 5UEF|1|C, 4LQ3|1|R, 4AFY|1|C, 5UEF|1|D, 4X4U|1|H, 3U2E|1|C(3) 1UVK|1|F, 1UVK|1|D, 1UVK|1|B(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15UEF|1|DRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12
21UVK|1|DThe structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.451
33U2E|1|CEAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322
44AFY|1|CCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012
54AFY|1|DCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012
63U2E|1|DEAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322
71UVK|1|FThe structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.451
81UVK|1|BThe structural basis for RNA specificity and Ca2+ inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complexX-RAY DIFFRACTION2.451
94X4U|1|HCrystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACCX-RAY DIFFRACTION2.72
104LQ3|1|RCrystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDSX-RAY DIFFRACTION2.62
115UEF|1|CRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12