#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15NEP|1|A (rep)RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidineX-ray diffraction1.62017-05-31
25NOM|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-ray diffraction1.932017-05-31
35NEX|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatineX-ray diffraction1.722017-05-31
45NEQ|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidineX-ray diffraction1.692017-05-31
55NEO|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loopX-ray diffraction1.692017-05-31

Release history

Release2.130
Date2017-06-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_91124.1NR_3.5_91124.22.131(5) 5NOM|1|A, 5NEX|1|A, 5NEQ|1|A, 5NEP|1|A, 5NEO|1|A(0) (1) 5NEF|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NEX|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatineX-RAY DIFFRACTION1.7217
25NOM|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-RAY DIFFRACTION1.9317
35NEP|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidineX-RAY DIFFRACTION1.617
45NEQ|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidineX-RAY DIFFRACTION1.6917
55NEO|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loopX-RAY DIFFRACTION1.6917
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