Equivalence class NR_3.5_95556.3 Obsolete
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 4V90|1|AV (rep) | RNA (77-MER), 5'-R(*UP*AP*AP*AP*AP*AP*UP*GP*UP)-3' | Thermus thermophilus | Thermus thermophilus Ribosome | X-RAY DIFFRACTION | 2.95 | 2014-07-09 |
2 | 4WT8|1|D3 | A site tNA, E site tNA | Thermus thermophilus | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 2015-01-21 |
3 | 4V5A|1|AV+ 4V5A|1|AX | P-SITE RNA ASL-PHE, MRNA | Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet | X-RAY DIFFRACTION | 3.5 | 2014-07-09 | |
4 | 4V5A|1|CV+ 4V5A|1|CX | P-SITE RNA ASL-PHE, MRNA | Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet | X-RAY DIFFRACTION | 3.5 | 2014-07-09 | |
5 | 4WT8|1|C3 | A site tNA, E site tNA | Thermus thermophilus | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 2015-01-21 |
6 | 4WT8|1|C2 | A site tNA, E site tNA, mRNA | Thermus thermophilus | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 2015-01-21 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_3.5_95556.3 | NR_all_95556.2 | 2.30 | (6) 4WT8|1|C3, 4WT8|1|C2, 4V90|1|AV, 4V5A|1|AV+4V5A|1|AX, 4WT8|1|D3, 4V5A|1|CV+4V5A|1|CX | (0) | (4) 4V8U|1|AV, 4V68|1|AW, 3BBV|1|z, 4V8U|1|CV |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 4WT8|1|D3 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 76 |
2 | 4WT8|1|C3 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 76 |
3 | 4WT8|1|C2 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 75 |
4 | 4V5A|1|CV+4V5A|1|CX | Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet | X-RAY DIFFRACTION | 3.5 | 17 |
5 | 4V5A|1|AV+4V5A|1|AX | Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet | X-RAY DIFFRACTION | 3.5 | 17 |
6 | 4V90|1|AV | Thermus thermophilus Ribosome | X-RAY DIFFRACTION | 2.95 | 76 |