NR_3.5_97519.2

Members (127)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	1VY4\|1\|BA (rep)	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2819	2014-08-20
2	4V8I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2798	2014-07-09
3	4V9R\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2731	2014-07-09
4	4W2H\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2822	2014-10-15
5	4V9S\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2731	2014-07-09
6	4W2F\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2871	2014-10-15
7	4W2G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2819	2014-10-15
8	4W2I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2822	2014-10-15
9	4V8I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2827	2014-07-09
10	4V9R\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2714	2014-07-09
11	4V9S\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2714	2014-07-09
12	4V95\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YAEJ bound to the 70S ribosome	X-ray diffraction	3.2	2752	2014-07-09
13	1VY5\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2819	2014-08-20
14	1VY4\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2800	2014-08-20
15	1VY7\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2819	2014-08-20
16	4W2H\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2800	2014-10-15
17	4V8H\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of HPF bound to the 70S ribosome.	X-ray diffraction	3.1	2814	2014-07-09
18	4V8A\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-ray diffraction	3.2	2827	2014-07-09
19	4V8G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2814	2014-07-09
20	4W2F\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2800	2014-10-15
21	4V8G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2809	2014-07-09
22	4W2I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2800	2014-10-15
23	1VY6\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2819	2014-08-20
24	4V8A\|1\|AA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-ray diffraction	3.2	2827	2014-07-09
25	4V83\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.5	2760	2014-07-09
26	4V83\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.5	2760	2014-07-09
27	4V8H\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of HPF bound to the 70S ribosome.	X-ray diffraction	3.1	2837	2014-07-09
28	4V95\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YAEJ bound to the 70S ribosome	X-ray diffraction	3.2	2722	2014-07-09
29	4W2G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2800	2014-10-15
30	1VY5\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2800	2014-08-20
31	4V9H\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	2859	2014-07-09
32	1VY7\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2800	2014-08-20
33	4LNT\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2883	2014-08-06
34	4V6F\|1\|DA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	2912	2014-07-09
35	4LT8\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2883	2014-08-06
36	4V84\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.4	2760	2014-07-09
37	4W2E\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2873	2014-10-01
38	4V84\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-ray diffraction	3.4	2760	2014-07-09
39	4V8B\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2912	2014-07-09
40	4V9N\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-ray diffraction	3.4	2789	2014-07-09
41	4L47\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2882	2014-08-06
42	4V5D\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	2807	2014-07-09
43	4V9N\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-ray diffraction	3.4	2789	2014-07-09
44	4LT8\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2882	2014-08-06
45	4V87\|1\|AA	Large subunit ribosomal RNA	RNA (2909-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2912	2014-07-09
46	1VY6\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2800	2014-08-20
47	4V5D\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-ray diffraction	3.5	2807	2014-07-09
48	4V9I\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2807	2014-07-09
49	4V9I\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2807	2014-07-09
50	4V5E\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	2886	2014-07-09
51	4V8C\|1\|AA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2912	2014-07-09
52	4V9Q\|1\|AA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-ray diffraction	3.4	2832	2014-07-09
53	4V5E\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Insights into translational termination from the structure of RF2 bound to the ribosome	X-ray diffraction	3.45	2886	2014-07-09
54	4V9Q\|1\|CA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-ray diffraction	3.4	2832	2014-07-09
55	4V8N\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-ray diffraction	3.1	2848	2014-07-09
56	4V67\|1\|DA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2879	2014-07-09
57	4V8B\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2907	2014-07-09
58	4LNT\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2882	2014-08-06
59	4V8N\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-ray diffraction	3.1	2848	2014-07-09
60	4V5C\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2807	2014-07-09
61	4V67\|1\|BA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2879	2014-07-09
62	4V87\|1\|DA	Large subunit ribosomal RNA	RNA (2909-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2907	2014-07-09
63	4V8D\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2912	2014-07-09
64	4WT8\|1\|D1	Large subunit ribosomal RNA	23S rRNA (2899-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-ray diffraction	3.4	2807	2015-01-21
65	4L47\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-ray diffraction	3.22	2883	2014-08-06
66	4V5C\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2807	2014-07-09
67	4V6G\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2886	2014-07-09
68	4V7Y\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2725	2014-07-09
69	4V6F\|1\|AA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-ray diffraction	3.1	2909	2014-07-09
70	4V7X\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2725	2014-07-09
71	4V7J\|1\|BA	Large subunit ribosomal RNA	RNA (2848-MER)	Thermus thermophilus	Bacteria	RF02541	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-ray diffraction	3.3	2848	2014-07-09
72	4LSK\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2883	2014-08-06
73	4V7Y\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2725	2014-07-09
74	4V7J\|1\|AA	Large subunit ribosomal RNA	RNA (2848-MER)	Thermus thermophilus	Bacteria	RF02541	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-ray diffraction	3.3	2848	2014-07-09
75	4V7X\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2725	2014-07-09
76	4V8F\|1\|AA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2912	2014-07-09
77	4V7W\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2725	2014-07-09
78	4WT8\|1\|C1	Large subunit ribosomal RNA	23S rRNA (2899-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-ray diffraction	3.4	2807	2015-01-21
79	4V7M\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2789	2014-07-09
80	4V7W\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2725	2014-07-09
81	4V8E\|1\|AA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2912	2014-07-09
82	4V6A\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2767	2014-07-09
83	1VVJ\|1\|YA	Large subunit ribosomal RNA	23S rRNA, RNA (5'-R(CPCP*(PPU))-3')	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2882	2014-08-06
84	4V90\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Thermus thermophilus Ribosome	X-ray diffraction	2.95	2901	2014-07-09
85	4V9B\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of the 70S ribosome with tigecycline.	X-ray diffraction	3.1	2912	2014-07-09
86	4V5K\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2807	2014-07-09
87	4V8D\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2907	2014-07-09
88	4LSK\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2882	2014-08-06
89	4V8C\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2909	2014-07-09
90	4V5K\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2807	2014-07-09
91	4V5J\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	2901	2014-07-09
92	4V5J\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-ray diffraction	3.1	2901	2014-07-09
93	1VVJ\|1\|RA	Large subunit ribosomal RNA	23S rRNA, RNA (5'-R(CPCP*(PPU))-3')	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2883	2014-08-06
94	4V8X\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of Thermus thermophilus ribosome	X-ray diffraction	3.35	2848	2014-07-09
95	4V63\|1\|BA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2879	2014-07-09
96	4V8E\|1\|CA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2907	2014-07-09
97	4V8X\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of Thermus thermophilus ribosome	X-ray diffraction	3.35	2848	2014-07-09
98	4V63\|1\|DA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2879	2014-07-09
99	4V6G\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2885	2014-07-09
100	4V51\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2772	2014-07-09
101	4V51\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2772	2014-07-09
102	4V7M\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2775	2014-07-09
103	4V9A\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of the 70S ribosome with tetracycline.	X-ray diffraction	3.3	2912	2014-07-09
104	4V8F\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2907	2014-07-09
105	4V9K\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2879	2014-07-09
106	4V9L\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2879	2014-07-09
107	4V7Z\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-ray diffraction	3.1	2725	2014-07-09
108	4V7Z\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-ray diffraction	3.1	2725	2014-07-09
109	4V9B\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of the 70S ribosome with tigecycline.	X-ray diffraction	3.1	2906	2014-07-09
110	4V6A\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2777	2014-07-09
111	4V9L\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2879	2014-07-09
112	4V5P\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2901	2014-07-09
113	4V9A\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of the 70S ribosome with tetracycline.	X-ray diffraction	3.3	2909	2014-07-09
114	4V5P\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2901	2014-07-09
115	4V9K\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-ray diffraction	3.5	2879	2014-07-09
116	4V8Q\|1\|AA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2901	2014-07-09
117	4V5R\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2901	2014-07-09
118	4V5R\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2901	2014-07-09
119	4V5L\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-ray diffraction	3.1	2901	2014-07-09
120	4V7L\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2800	2014-07-09
121	4V5S\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2901	2014-07-09
122	4V5Q\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2901	2014-07-09
123	4V5S\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-ray diffraction	3.1	2901	2014-07-09
124	4V5Q\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-ray diffraction	3.1	2901	2014-07-09
125	4V5A\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-ray diffraction	3.5	2767	2014-07-09
126	4V5A\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-ray diffraction	3.5	2767	2014-07-09
127	4V7L\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2800	2014-07-09

Release history

Release	2.7
Date	2015-01-23

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_97519.2	NR_all_97519.1	2.7	(125) 1VVJ\|1\|RA, 1VVJ\|1\|YA, 1VY4\|1\|BA, 1VY4\|1\|DA, 1VY5\|1\|BA, 1VY5\|1\|DA, 1VY6\|1\|BA, 1VY6\|1\|DA, 1VY7\|1\|BA, 1VY7\|1\|DA, 4L47\|1\|RA, 4L47\|1\|YA, 4LNT\|1\|RA, 4LNT\|1\|YA, 4LSK\|1\|RA, 4LSK\|1\|YA, 4LT8\|1\|RA, 4LT8\|1\|YA, 4V51\|1\|BA, 4V51\|1\|DA, 4V5A\|1\|BA, 4V5A\|1\|DA, 4V5C\|1\|BA, 4V5C\|1\|DA, 4V5D\|1\|BA, 4V5D\|1\|DA, 4V5E\|1\|BA, 4V5E\|1\|DA, 4V5J\|1\|BA, 4V5J\|1\|DA, 4V5K\|1\|BA, 4V5K\|1\|DA, 4V5L\|1\|BA, 4V5P\|1\|BA, 4V5P\|1\|DA, 4V5Q\|1\|BA, 4V5Q\|1\|DA, 4V5R\|1\|BA, 4V5R\|1\|DA, 4V5S\|1\|BA, 4V5S\|1\|DA, 4V63\|1\|BA, 4V63\|1\|DA, 4V67\|1\|BA, 4V67\|1\|DA, 4V6A\|1\|BA, 4V6A\|1\|DA, 4V6F\|1\|AA, 4V6F\|1\|DA, 4V6G\|1\|BA, 4V6G\|1\|DA, 4V7J\|1\|AA, 4V7J\|1\|BA, 4V7L\|1\|BA, 4V7L\|1\|DA, 4V7M\|1\|BA, 4V7M\|1\|DA, 4V7W\|1\|BA, 4V7W\|1\|DA, 4V7X\|1\|BA, 4V7X\|1\|DA, 4V7Y\|1\|BA, 4V7Y\|1\|DA, 4V7Z\|1\|BA, 4V7Z\|1\|DA, 4V83\|1\|BA, 4V83\|1\|DA, 4V84\|1\|BA, 4V84\|1\|DA, 4V87\|1\|AA, 4V87\|1\|DA, 4V8A\|1\|AA, 4V8A\|1\|BA, 4V8B\|1\|BA, 4V8B\|1\|DA, 4V8C\|1\|AA, 4V8C\|1\|BA, 4V8D\|1\|BA, 4V8D\|1\|DA, 4V8E\|1\|AA, 4V8E\|1\|CA, 4V8F\|1\|AA, 4V8F\|1\|DA, 4V8G\|1\|BA, 4V8G\|1\|DA, 4V8H\|1\|BA, 4V8H\|1\|DA, 4V8I\|1\|BA, 4V8I\|1\|DA, 4V8N\|1\|BA, 4V8N\|1\|DA, 4V8Q\|1\|AA, 4V8X\|1\|BA, 4V8X\|1\|DA, 4V90\|1\|BA, 4V95\|1\|BA, 4V95\|1\|DA, 4V9A\|1\|BA, 4V9A\|1\|DA, 4V9B\|1\|BA, 4V9B\|1\|DA, 4V9H\|1\|BA, 4V9I\|1\|BA, 4V9I\|1\|DA, 4V9K\|1\|BA, 4V9K\|1\|DA, 4V9L\|1\|BA, 4V9L\|1\|DA, 4V9N\|1\|BA, 4V9N\|1\|DA, 4V9Q\|1\|AA, 4V9Q\|1\|CA, 4V9R\|1\|BA, 4V9R\|1\|DA, 4V9S\|1\|BA, 4V9S\|1\|DA, 4W2E\|1\|A, 4W2F\|1\|BA, 4W2F\|1\|DA, 4W2G\|1\|BA, 4W2G\|1\|DA, 4W2H\|1\|BA, 4W2H\|1\|DA, 4W2I\|1\|BA, 4W2I\|1\|DA	(2) 4WT8\|1\|C1, 4WT8\|1\|D1	(44) 4L71\|1\|RA, 4L71\|1\|YA, 4LEL\|1\|RA, 4LEL\|1\|YA, 4LFZ\|1\|RA, 4LFZ\|1\|YA, 4P6F\|1\|RA, 4P6F\|1\|YA, 4P70\|1\|RA, 4P70\|1\|YA, 4V42\|1\|BA, 4V4I\|1\|w, 4V4J\|1\|w, 4V4P\|1\|AA, 4V4R\|1\|BA, 4V4S\|1\|BA, 4V4T\|1\|BA, 4V4X\|1\|BA, 4V4Y\|1\|BA, 4V4Z\|1\|BA, 4V5F\|1\|BA, 4V5F\|1\|DA, 4V5G\|1\|BA, 4V5G\|1\|DA, 4V5M\|1\|BA, 4V5N\|1\|BA, 4V68\|1\|BA, 4V7K\|1\|AA, 4V7K\|1\|BA, 4V7P\|1\|BA, 4V7P\|1\|CA, 4V8J\|1\|BA, 4V8J\|1\|DA, 4V8O\|1\|BA, 4V8U\|1\|BA, 4V8U\|1\|DA, 4V97\|1\|BA, 4V97\|1\|DA, 4V9J\|1\|BA, 4V9J\|1\|DA, 4V9M\|1\|BA, 4V9M\|1\|DA, 4W29\|1\|BA, 4W29\|1\|DA

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	4V90\|1\|BA	Thermus thermophilus Ribosome	X-RAY DIFFRACTION	2.95	2901
2	4V9H\|1\|BA	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	2859
3	4V6A\|1\|DA	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	2777
4	4V6A\|1\|BA	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	2767
5	4V7Z\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-RAY DIFFRACTION	3.1	2725
6	4V7Z\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.	X-RAY DIFFRACTION	3.1	2725
7	4V8Q\|1\|AA	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	2901
8	4V5P\|1\|BA	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	2901
9	4V5P\|1\|DA	The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	2901
10	4V5R\|1\|BA	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	2901
11	4V5R\|1\|DA	The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	2901
12	4V5S\|1\|DA	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	2901
13	4V5S\|1\|BA	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.	X-RAY DIFFRACTION	3.1	2901
14	4V5Q\|1\|BA	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	2901
15	4V5Q\|1\|DA	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome	X-RAY DIFFRACTION	3.1	2901
16	4V5L\|1\|BA	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog	X-RAY DIFFRACTION	3.1	2901
17	4V9L\|1\|BA	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	2879
18	4V9L\|1\|DA	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	2879
19	4V9K\|1\|DA	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	2879
20	4V9K\|1\|BA	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.	X-RAY DIFFRACTION	3.5	2879
21	4WT8\|1\|D1	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-RAY DIFFRACTION	3.4	2807
22	4WT8\|1\|C1	Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex	X-RAY DIFFRACTION	3.4	2807
23	4V5A\|1\|DA	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-RAY DIFFRACTION	3.5	2767
24	4V5A\|1\|BA	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet	X-RAY DIFFRACTION	3.5	2767
25	4V51\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
26	4V51\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
27	4V7Y\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
28	4V7Y\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
29	4V7X\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
30	4V7X\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
31	4V7W\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
32	4V7W\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
33	4V7M\|1\|BA	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	2789
34	4V5D\|1\|BA	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	2807
35	4V5D\|1\|DA	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.	X-RAY DIFFRACTION	3.5	2807
36	4V5C\|1\|DA	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	2807
37	4V5C\|1\|BA	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	2807
38	4V7L\|1\|BA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
39	4V7L\|1\|DA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
40	4V9I\|1\|BA	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	2807
41	4V9I\|1\|DA	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	2807
42	4V5K\|1\|BA	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	2807
43	4V5K\|1\|DA	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	2807
44	4V5J\|1\|DA	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	2901
45	4V5J\|1\|BA	Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release	X-RAY DIFFRACTION	3.1	2901
46	4V8N\|1\|BA	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-RAY DIFFRACTION	3.1	2848
47	4V8N\|1\|DA	The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.	X-RAY DIFFRACTION	3.1	2848
48	4V7J\|1\|AA	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-RAY DIFFRACTION	3.3	2848
49	4V7J\|1\|BA	Structure of RelE nuclease bound to the 70S ribosome (precleavage state)	X-RAY DIFFRACTION	3.3	2848
50	4V8X\|1\|BA	Structure of Thermus thermophilus ribosome	X-RAY DIFFRACTION	3.35	2848
51	4V8X\|1\|DA	Structure of Thermus thermophilus ribosome	X-RAY DIFFRACTION	3.35	2848
52	4V7M\|1\|DA	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	2775
53	4V5E\|1\|BA	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	2886
54	4V5E\|1\|DA	Insights into translational termination from the structure of RF2 bound to the ribosome	X-RAY DIFFRACTION	3.45	2886
55	4V9Q\|1\|CA	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-RAY DIFFRACTION	3.4	2832
56	4V9Q\|1\|AA	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.	X-RAY DIFFRACTION	3.4	2832
57	4V9N\|1\|DA	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-RAY DIFFRACTION	3.4	2789
58	4V9N\|1\|BA	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.	X-RAY DIFFRACTION	3.4	2789
59	4V67\|1\|BA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
60	4V67\|1\|DA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
61	4V63\|1\|DA	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	2879
62	4V63\|1\|BA	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	2879
63	4V83\|1\|DA	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.5	2760
64	4V83\|1\|BA	Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.5	2760
65	4V84\|1\|BA	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.4	2760
66	4V84\|1\|DA	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.	X-RAY DIFFRACTION	3.4	2760
67	4V95\|1\|DA	Crystal structure of YAEJ bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	2722
68	4V95\|1\|BA	Crystal structure of YAEJ bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	2752
69	4V8I\|1\|BA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2827
70	4V8I\|1\|DA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2798
71	4V8A\|1\|BA	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-RAY DIFFRACTION	3.2	2827
72	4V8A\|1\|AA	The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.	X-RAY DIFFRACTION	3.2	2827
73	4V8H\|1\|BA	Crystal structure of HPF bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	2837
74	4V8H\|1\|DA	Crystal structure of HPF bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	2814
75	4V8G\|1\|BA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2809
76	4V8G\|1\|DA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2814
77	4V9S\|1\|BA	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	2731
78	4V9R\|1\|BA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2731
79	4W2F\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2871
80	4W2G\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2819
81	1VY4\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2819
82	1VY5\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2819
83	1VY6\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2819
84	4W2H\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2822
85	1VY7\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2819
86	4W2I\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2822
87	4W2I\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2800
88	1VY7\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2800
89	4W2H\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2800
90	1VY6\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2800
91	1VY4\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2800
92	1VY5\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2800
93	4W2G\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2800
94	4W2F\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2800
95	4V9R\|1\|DA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2714
96	4V9S\|1\|DA	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	2714
97	4W2E\|1\|A	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2873
98	4V6G\|1\|BA	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	2885
99	4V6F\|1\|AA	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	2909
100	4V8C\|1\|BA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	2909
101	4V8B\|1\|DA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2907
102	4V87\|1\|DA	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	2907
103	4V8D\|1\|DA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2907
104	4V8E\|1\|CA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	2907
105	4V8F\|1\|DA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	2907
106	4V9B\|1\|DA	Crystal Structure of the 70S ribosome with tigecycline.	X-RAY DIFFRACTION	3.1	2906
107	4V9A\|1\|DA	Crystal Structure of the 70S ribosome with tetracycline.	X-RAY DIFFRACTION	3.3	2909
108	4V9A\|1\|BA	Crystal Structure of the 70S ribosome with tetracycline.	X-RAY DIFFRACTION	3.3	2912
109	4V9B\|1\|BA	Crystal Structure of the 70S ribosome with tigecycline.	X-RAY DIFFRACTION	3.1	2912
110	4LNT\|1\|YA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2883
111	4LT8\|1\|YA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	2883
112	4V6F\|1\|DA	Elongation complex of the 70S ribosome with three tRNAs and mRNA.	X-RAY DIFFRACTION	3.1	2912
113	4V8C\|1\|AA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	2912
114	4V8B\|1\|BA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2912
115	4V87\|1\|AA	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	2912
116	4V8D\|1\|BA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2912
117	4V8F\|1\|AA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	2912
118	4V8E\|1\|AA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	2912
119	1VVJ\|1\|YA	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	2882
120	4V6G\|1\|DA	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	2886
121	4L47\|1\|YA	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	2883
122	4LSK\|1\|YA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	2883
123	4LT8\|1\|RA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	2882
124	4L47\|1\|RA	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	3.22	2882
125	1VVJ\|1\|RA	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	2883
126	4LSK\|1\|RA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	2882
127	4LNT\|1\|RA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2882

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_97519.2 Obsolete

Release history

Parents

Children