Equivalence class NR_4.0_00500.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7KGB|1|B (rep) | 5S ribosomal RNA | 5S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00001 | CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 | Electron microscopy | 2.7 | 2022-01-19 |
| 2 | 5XYM|1|B | 5S ribosomal RNA | 5S RNA | Mycolicibacterium smegmatis | Bacteria | RF00001 | Large subunit of Mycobacterium smegmatis | Electron microscopy | 3.08 | 2017-09-27 |
| 3 | 5O60|1|B | 5S ribosomal RNA | 5S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00001 | Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | Electron microscopy | 3.18 | 2017-07-12 |
| 4 | 6DZP|1|B | 5S ribosomal RNA | 5S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00001 | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit | Electron microscopy | 3.42 | 2018-10-03 |
| 5 | 6DZI|1|B | 5S ribosomal RNA | 5S RNA (118-MER) | Mycolicibacterium smegmatis | Bacteria | RF00001 | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | Electron microscopy | 3.46 | 2018-09-26 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5XYM|1|B | Large subunit of Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.08 | 116 |
| 2 | 5O60|1|B | Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.18 | 118 |
| 3 | 6DZP|1|B | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit | ELECTRON MICROSCOPY | 3.42 | 118 |
| 4 | 6DZI|1|B | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | ELECTRON MICROSCOPY | 3.46 | 118 |
| 5 | 7KGB|1|B | CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 | ELECTRON MICROSCOPY | 2.7 | 115 |