#IFECompound(s)RNA source organismTitleMethodResolutionDate
15UED|1|A+ 5UED|1|B (rep)RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')GX-RAY DIFFRACTION1.52017-07-05
26C8J|1|A+ 6C8J|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 15 min soakingX-RAY DIFFRACTION1.52018-05-30
36C8D|1|A+ 6C8D|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-dGMP complex with Mg ionX-RAY DIFFRACTION1.922018-05-30
46C8I|1|A+ 6C8I|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 5 min soakingX-RAY DIFFRACTION1.772018-05-30
55UEE|1|A+ 5UEE|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')GX-RAY DIFFRACTION1.92017-07-05
66C8L|1|A+ 6C8L|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 1h soakingX-RAY DIFFRACTION2.252018-05-30
76C8E|1|A+ 6C8E|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-imidazolium-bridged intermediate complex, 4h soakingX-RAY DIFFRACTION1.82018-05-30
86U8U|1|A+ 6U8U|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA duplex bound with TNA 3'-3' imidazolium dimerX-RAY DIFFRACTION2.42020-12-09
95UEF|1|A+ 5UEF|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12017-07-05
106C8K|1|A+ 6C8K|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 30 min soakingX-RAY DIFFRACTION2.262018-05-30
116CAB|1|A+ 6CAB|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-dGMP complex with Sr ionX-RAY DIFFRACTION2.52018-05-30
126OWL|1|ARNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*R)-3')synthetic constructRNA oligonucleotides with 3'-arabino guanosine co-crystallized with GMPX-RAY DIFFRACTION22020-02-26
135UEG|1|A+ 5UEG|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.62017-07-05
145UEG|1|C+ 5UEG|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.62017-07-05

Release history

Release3.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.194
Date2020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-01

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16CAB|1|A+6CAB|1|BRNA-dGMP complex with Sr ionX-RAY DIFFRACTION2.512
26C8L|1|A+6C8L|1|BRNA-activated 2-AIpG monomer complex, 1h soakingX-RAY DIFFRACTION2.2510
36C8K|1|A+6C8K|1|BRNA-activated 2-AIpG monomer complex, 30 min soakingX-RAY DIFFRACTION2.2610
45UEE|1|A+5UEE|1|BRNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')GX-RAY DIFFRACTION1.911
56C8E|1|A+6C8E|1|BRNA-imidazolium-bridged intermediate complex, 4h soakingX-RAY DIFFRACTION1.810
66C8J|1|A+6C8J|1|BRNA-activated 2-AIpG monomer complex, 15 min soakingX-RAY DIFFRACTION1.510
76C8D|1|A+6C8D|1|BRNA-dGMP complex with Mg ionX-RAY DIFFRACTION1.9210
85UEG|1|C+5UEG|1|DRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.611
95UEG|1|A+5UEG|1|BRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.611
105UEF|1|A+5UEF|1|BRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.111
115UED|1|A+5UED|1|BRNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')GX-RAY DIFFRACTION1.511
126C8I|1|A+6C8I|1|BRNA-activated 2-AIpG monomer complex, 5 min soakingX-RAY DIFFRACTION1.7710
136U8U|1|A+6U8U|1|BRNA duplex bound with TNA 3'-3' imidazolium dimerX-RAY DIFFRACTION2.410
146OWL|1|ARNA oligonucleotides with 3'-arabino guanosine co-crystallized with GMPX-RAY DIFFRACTION29