Equivalence class NR_4.0_04576.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8EVP|1|EC (rep) | Internal ribosome entry site | Taura syndrome virus | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I | Electron microscopy | 2.38 | 2023-09-06 | |||
| 2 | 8EWC|1|EC | internal ribosome entry site (IRES) | Taura syndrome virus | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II | Electron microscopy | 2.45 | 2023-09-06 | |||
| 3 | 8EUB|1|EC | Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA | Taura syndrome virus | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I | Electron microscopy | 2.52 | 2023-09-06 | |||
| 4 | 8EVQ|1|EC | Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA | Taura syndrome virus | Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I | Electron microscopy | 2.72 | 2023-09-06 | |||
| 5 | 8EVR|1|EC | TSV IRES | Taura syndrome virus | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II | Electron microscopy | 2.87 | 2023-09-06 | |||
| 6 | 5JUP|1|EC | IRES | Taura syndrome virus | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit) | Electron microscopy | 3.5 | 2016-10-05 | |||
| 7 | 8EWB|1|EC | Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA | Taura syndrome virus | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III | Electron microscopy | 2.87 | 2023-09-06 | |||
| 8 | 5JUU|1|EC | IRES | Taura syndrome virus | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit) | Electron microscopy | 4 | 2016-10-05 | |||
| 9 | 5JUO|1|EC | IRES | Taura syndrome virus | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit) | Electron microscopy | 4 | 2016-10-05 | |||
| 10 | 5JUT|1|EC | IRES | Taura syndrome virus | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit) | Electron microscopy | 4 | 2016-10-05 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5JUU|1|EC | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit) | ELECTRON MICROSCOPY | 4 | 198 |
| 2 | 8EWC|1|EC | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II | ELECTRON MICROSCOPY | 2.45 | 192 |
| 3 | 8EVP|1|EC | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I | ELECTRON MICROSCOPY | 2.38 | 192 |
| 4 | 8EWB|1|EC | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III | ELECTRON MICROSCOPY | 2.87 | 153 |
| 5 | 8EVQ|1|EC | Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I | ELECTRON MICROSCOPY | 2.72 | 200 |
| 6 | 8EUB|1|EC | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I | ELECTRON MICROSCOPY | 2.52 | 195 |
| 7 | 8EVR|1|EC | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II | ELECTRON MICROSCOPY | 2.87 | 195 |
| 8 | 5JUP|1|EC | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit) | ELECTRON MICROSCOPY | 3.5 | 198 |
| 9 | 5JUO|1|EC | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit) | ELECTRON MICROSCOPY | 4 | 198 |
| 10 | 5JUT|1|EC | Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit) | ELECTRON MICROSCOPY | 4 | 198 |