#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DB (rep)5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
25JC9|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
35J8A|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
44YBB|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
56I7V|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
64WOI|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
85J91|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
94U27|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
105J88|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
114WF1|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
124WOI|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
134V9D|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
144V9P|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
154V9P|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
164U24|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
174V9O|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
184WWW|1|RB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
194U26|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
204V9P|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
214V7T|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
224V9O|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
234V6C|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
244U25|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
254V9O|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
264V9P|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
274U1U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
284V7U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
294U20|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
304V7V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
314V9C|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
324U1V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
334V52|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
345J7L|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
354V52|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
364V7S|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
375J8A|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
384V9D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
394V50|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
405JC9|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
414V85|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
426BY1|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli pH03H9 complexX-ray diffraction3.942019-02-27
436I7V|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
444V57|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
454V64|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
464V64|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
474V57|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
484V6D|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
494V54|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
504V54|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
514V53|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
524V53|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
534V6E|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
544V9O|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
554U27|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
564V56|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
574V55|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
584WF1|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
595J88|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
604U25|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
616BY1|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli pH03H9 complexX-ray diffraction3.942019-02-27
624V4Q|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
634U1V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
644V55|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
654V50|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
664V56|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
674V89|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
684V4Q|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
694YBB|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
704U26|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
714U1U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
724V9C|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
734V7T|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
744U20|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
755IT8|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
764U24|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
774WWW|1|YB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
785J91|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
794V6C|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
804V6D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
814V7V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
824V7S|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
834V7U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
844V6E|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
854V5B|1|CA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
864V5B|1|AA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
875J5B|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
884V4H|1|BA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
894V4H|1|DA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
905J5B|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
915AFI|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000012.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
926ORE|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release complex 70SElectron microscopy2.92019-06-19
936U48|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.872019-09-18
945NWY|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF000012.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
955MDV|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
965H5U|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
976HRM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S d2d8 stapled ribosomeElectron microscopy2.962018-12-19
986H4N|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
996QUL|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy32019-04-10
1005WFS|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1015MDZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1026ENU|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1035MDW|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1045MGP|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1056ENF|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1065U9G|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1075U9F|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1085UYM|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1096C4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1105WDT|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1116OG7|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.32019-09-25
1125WE4|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1136OFX|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Non-rotated ribosome (Structure I)Electron microscopy3.32019-09-25
1144V80|1|BB5S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1154V80|1|DB5S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1163JBV|1|a5S ribosomal RNARNA (118-MER)Escherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1175GAE|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
1186I0Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.22018-12-05
1195MDY|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1205WFK|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1215LZD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1226OGI|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.42019-09-25
1233JCE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
1245O2R|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
1255LZE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
1266BU8|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
1276OSQ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
1285U4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
1296ORL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
1305KCR|1|1B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.62016-08-17
1315LZA|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.62016-11-23
1325UYL|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.62017-06-14
1335WE6|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
1345IQR|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1355WF0|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.62018-05-02
1366ENJ|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.72017-11-22
1373JBU|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
1385L3P|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
1395GAD|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
1406OSK|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated 70S complex at 60 msElectron microscopy3.62019-06-26
1413J9Z|1|LB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1426Q9A|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.72019-04-17
1436DNC|1|C5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.72018-07-04
1445JU8|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.62016-07-20
1455JTE|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.62016-07-20
1463JCJ|1|05S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1475UYQ|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.82017-06-07
1485GAH|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
1496GWT|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.82018-08-15
1506GXM|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.82018-08-22
1516GBZ|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate state 5Electron microscopy3.82018-06-20
1526OUO|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.72019-06-19
1536GC8|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate - 50S rec*Electron microscopy3.82018-06-20
1545GAG|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
1555UYP|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.92017-06-07
1566GC0|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate state 4Electron microscopy3.82018-06-20
1573J9Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1585KPW|1|285S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
1595UYK|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.92017-06-07
1606OGF|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).Electron microscopy3.92019-09-25
1615KPX|1|285S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
1626GXO|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.92018-08-15
1636GXN|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.92018-08-15
1643JCD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
1655KPS|1|295S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
1665KCS|1|1B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.92016-08-17
1675UYN|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy42017-06-07
1686OT3|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.92019-06-19
1696Q97|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.92019-03-13
1704UY8|1|B5S ribosomal RNARRNA-5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.82014-10-29
1715NP6|1|Z5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S structure prior to bypassingElectron microscopy3.62017-06-14
1726O9J|1|A5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S Elongation Competent RibosomeElectron microscopy3.92019-05-29
1736O9K|1|X5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S initiation complexElectron microscopy42019-05-29
1743J7Z|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
1753JA1|1|LB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01

Release history

Release3.933.94
Date2019-09-252019-10-03

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16Q97|1|3Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.9120
26BY1|1|DBE. coli pH03H9 complexX-RAY DIFFRACTION3.94118
34V9P|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
44V9O|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
55U4I|1|BStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.5118
66Q9A|1|3Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.7120
74V6D|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.81117
84V6E|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.71117
94V7U|1|DBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1117
104V7V|1|DBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29117
114V7T|1|DBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19117
124V7S|1|DBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25117
134V6C|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19117
144WWW|1|YBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1117
154V80|1|DBCrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.3117
164WOI|1|CB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3118
174V9C|1|BBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3118
186I7V|1|CBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9118
194U26|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8118
204U24|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9118
214U25|1|DBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9118
224U27|1|DBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8118
234U1V|1|DBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3118
244U20|1|DBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9118
254U1U|1|DBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95118
264WF1|1|DBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09118
274V9D|1|DBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3118
285IQR|1|3Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY3118
294V9O|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
304V9P|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
314V9P|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
324V9P|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
334V9O|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
343J7Z|1|BStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.9118
354V9O|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
364UY8|1|BMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.8118
376I0Y|1|BTnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.2118
384V9D|1|CBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3119
394WOI|1|BB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3119
404V9C|1|DBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3119
414V6E|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.71118
424V6D|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.81118
434V7U|1|BBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1118
444V6C|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19118
454V7T|1|BBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19118
464V7V|1|BBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29118
474V7S|1|BBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25118
484V80|1|BBCrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.3118
494WWW|1|RBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1118
504U1V|1|BBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3119
514U24|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9119
524U26|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8119
534U27|1|BBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8119
544U25|1|BBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9119
554WF1|1|BBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09119
564U1U|1|BBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95119
574U20|1|BBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9119
586I7V|1|DBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9119
595KCR|1|1BCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.6120
604YBB|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
615J5B|1|DBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8120
625J91|1|DBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96120
635J8A|1|DBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1120
645J7L|1|DBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3120
655JC9|1|DBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03120
665IT8|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12120
675J88|1|DBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32120
684V85|1|BBCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.2118
694V89|1|BBCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.7118
706GC0|1|B50S ribosomal subunit assembly intermediate state 4ELECTRON MICROSCOPY3.8119
716GBZ|1|B50S ribosomal subunit assembly intermediate state 5ELECTRON MICROSCOPY3.8119
726GC8|1|B50S ribosomal subunit assembly intermediate - 50S rec*ELECTRON MICROSCOPY3.8119
733JCJ|1|0Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.7118
746U48|1|CBE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.87118
755JTE|1|BBCryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.6118
765JU8|1|BBCryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.6118
775J88|1|CBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32118
785IT8|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12118
795JC9|1|CBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03118
805J7L|1|CBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3118
815J8A|1|CBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1118
825J5B|1|CBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8118
835J91|1|CBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96118
844YBB|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
855MDW|1|3Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.06120
865MDZ|1|3Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.1120
875MDV|1|3Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.97120
886C4I|1|BConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.24120
895MDY|1|3Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.35120
905NWY|1|O2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.9118
916ORE|1|3Release complex 70SELECTRON MICROSCOPY2.9120
926BY1|1|CBE. coli pH03H9 complexX-RAY DIFFRACTION3.94118
936OSQ|1|3RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.5120
946OSK|1|3RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.6120
956OT3|1|3RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.9120
966OUO|1|3RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.7120
976HRM|1|3E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.96120
983JCD|1|BStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.7118
993JCE|1|BStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.2118
1006O9K|1|X70S initiation complexELECTRON MICROSCOPY4118
1015NP6|1|Z70S structure prior to bypassingELECTRON MICROSCOPY3.6120
1025WE6|1|B70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.4120
1035WFK|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.4120
1045WF0|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.6120
1055WDT|1|B70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY3120
1065WE4|1|B70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.1120
1075O2R|1|BCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.4120
1085KPX|1|28Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.9120
1095KPS|1|29Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.9120
1105KPW|1|28Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.9120
1115WFS|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY3120
1125AFI|1|B2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.9120
1133J9Y|1|BCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.9120
1145KCS|1|1BCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.9120
1155L3P|1|BCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.7120
1166GXN|1|BCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.9120
1176GXM|1|BCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.8120
1186GWT|1|BCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.8120
1196GXO|1|BCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.9120
1205UYM|1|0270S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.2120
1216BU8|1|0270S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.5120
1225UYN|1|0270S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY4120
1235UYQ|1|0270S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.8120
1245UYP|1|0270S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.9120
1255UYK|1|0270S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.9120
1265UYL|1|0270S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.6120
1276DNC|1|CE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.7120
1285U9F|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.2119
1295U9G|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.2119
1305LZA|1|BStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.6120
1315LZE|1|BStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.5120
1326H4N|1|BStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY3120
1335MGP|1|BStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.1120
1346ENU|1|BPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.1120
1356ENJ|1|BPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.7120
1366ENF|1|BCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.2120
1375LZD|1|BStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.4120
1385H5U|1|BMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.01120
1395GAD|1|BRNC-SRP-SR complex early stateELECTRON MICROSCOPY3.7120
1405GAH|1|BRNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.8120
1415GAG|1|BRNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.8120
1426QUL|1|BStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY3120
1435GAE|1|BRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.33120
1446OGF|1|270S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).ELECTRON MICROSCOPY3.9120
1456OG7|1|270S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.3120
1466OFX|1|2Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.3120
1476OGI|1|270S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.4120
1486ORL|1|3RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.5120
1493J9Z|1|LBActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.6120
1503JA1|1|LBActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.6120
1514V56|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.93117
1524V56|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.93117
1534V64|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
1544V53|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.54117
1554V55|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4117
1564V54|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
1574V52|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
1584V57|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
1594V57|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
1604V52|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
1614V55|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4117
1624V53|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.54117
1634V64|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
1644V54|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
1654V50|1|BACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
1664V50|1|DACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
1674V4H|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
1684V4Q|1|BACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
1696O9J|1|A70S Elongation Competent RibosomeELECTRON MICROSCOPY3.9117
1704V5B|1|AAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.74117
1714V5B|1|CAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.74117
1724V4Q|1|DACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
1734V4H|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
1743JBV|1|aMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.32117
1753JBU|1|aMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.64118
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