#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14J7L|1|B (rep)RNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-ray diffraction1.82013-03-27
25W0M|1|JU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
35BUD|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-ray diffraction1.992015-07-08
45W0M|1|IU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
55W0M|1|HU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
64J7M|1|BRNA (5'-R(P*UP*(U37)P*(U37)P*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-ray diffraction1.72013-03-27
75BUD|1|DRNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-ray diffraction1.992015-07-08
86A4E|1|BRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-ray diffraction2.452019-03-13
96A4E|1|DRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-ray diffraction2.452019-03-13
107OG6|1|RRNA (5'-R(P*UP*UP*UP*UP*U)-3')Alternanthera mosaic virusStructure of Alternanthera Mosaic VLP by cryoEMElectron microscopy3.32021-06-23
116HXX|1|AaRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
126HXX|1|AbRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
136HXX|1|AcRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
146HXX|1|AdRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
156HXX|1|AeRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
166HXX|1|AfRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
176HXX|1|AgRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
186HXX|1|AhRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
196HXX|1|AiRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
206HXX|1|AjRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
216HXX|1|AkRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
226HXX|1|AlRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
236HXX|1|AmRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
246HXX|1|AnRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
256HXX|1|AoRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
266HXX|1|ApRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
276HXX|1|AqRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
286HXX|1|ArRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
296HXX|1|AsRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
306HXX|1|AtRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
316HXX|1|AuRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
326HXX|1|AvRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
336HXX|1|AwRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
346HXX|1|AxRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
356HXX|1|AyRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
366HXX|1|AzRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
376HXX|1|BaRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
386HXX|1|BbRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
396HXX|1|BcRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
406HXX|1|BdRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
416HXX|1|BeRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
426HXX|1|BfRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
436HXX|1|BgRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
446HXX|1|BhRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
456HXX|1|BiRNA (5'-R(P*UP*UP*UP*UP*U)-3')Potato virus YPotato virus YElectron microscopy3.42019-08-07
465FN1|1|B5'-R(*UP*UP*UP*UP*UP)-3'Pepino mosaic virusElectron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)Electron microscopy3.92015-12-30
475ODV|1|aRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
485ODV|1|bRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
495ODV|1|cRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
505ODV|1|dRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
515ODV|1|eRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
525ODV|1|fRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
535ODV|1|gRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
545ODV|1|hRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
555ODV|1|iRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
565ODV|1|jRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
575ODV|1|kRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
585ODV|1|lRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
595ODV|1|mRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
605ODV|1|nRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
615ODV|1|oRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
625ODV|1|pRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
635ODV|1|qRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
645ODV|1|rRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
655ODV|1|sRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
665ODV|1|tRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
675ODV|1|uRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
685ODV|1|vRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
695ODV|1|wRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27
705ODV|1|xRNA (5'-R(P*UP*UP*UP*UP*U)-3')Watermelon mosaic virusStructure of Watermelon mosaic virus potyvirus.Electron microscopy42017-09-27

Release history

Release3.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.235
Date2021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-15

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15FN1|1|BElectron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)ELECTRON MICROSCOPY3.95
25W0M|1|HStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
35W0M|1|IStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
45W0M|1|JStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
57OG6|1|RStructure of Alternanthera Mosaic VLP by cryoEMELECTRON MICROSCOPY3.35
66HXX|1|BfPotato virus YELECTRON MICROSCOPY3.45
76HXX|1|BhPotato virus YELECTRON MICROSCOPY3.45
86HXX|1|AyPotato virus YELECTRON MICROSCOPY3.45
96HXX|1|AtPotato virus YELECTRON MICROSCOPY3.45
106HXX|1|AbPotato virus YELECTRON MICROSCOPY3.45
116HXX|1|AfPotato virus YELECTRON MICROSCOPY3.45
126HXX|1|AsPotato virus YELECTRON MICROSCOPY3.45
136HXX|1|AlPotato virus YELECTRON MICROSCOPY3.45
146HXX|1|AkPotato virus YELECTRON MICROSCOPY3.45
156HXX|1|AnPotato virus YELECTRON MICROSCOPY3.45
166HXX|1|AxPotato virus YELECTRON MICROSCOPY3.45
176HXX|1|AvPotato virus YELECTRON MICROSCOPY3.45
186HXX|1|AqPotato virus YELECTRON MICROSCOPY3.45
196HXX|1|BaPotato virus YELECTRON MICROSCOPY3.45
206HXX|1|BgPotato virus YELECTRON MICROSCOPY3.45
216HXX|1|BdPotato virus YELECTRON MICROSCOPY3.45
226HXX|1|AePotato virus YELECTRON MICROSCOPY3.45
236HXX|1|AjPotato virus YELECTRON MICROSCOPY3.45
246HXX|1|AaPotato virus YELECTRON MICROSCOPY3.45
256HXX|1|AcPotato virus YELECTRON MICROSCOPY3.45
266HXX|1|BePotato virus YELECTRON MICROSCOPY3.45
276HXX|1|AwPotato virus YELECTRON MICROSCOPY3.45
286HXX|1|BiPotato virus YELECTRON MICROSCOPY3.45
296HXX|1|ArPotato virus YELECTRON MICROSCOPY3.45
306HXX|1|AoPotato virus YELECTRON MICROSCOPY3.45
316HXX|1|AzPotato virus YELECTRON MICROSCOPY3.45
326HXX|1|ApPotato virus YELECTRON MICROSCOPY3.45
336HXX|1|AgPotato virus YELECTRON MICROSCOPY3.45
346HXX|1|AdPotato virus YELECTRON MICROSCOPY3.45
356HXX|1|AiPotato virus YELECTRON MICROSCOPY3.45
366HXX|1|BcPotato virus YELECTRON MICROSCOPY3.45
376HXX|1|AmPotato virus YELECTRON MICROSCOPY3.45
386HXX|1|AhPotato virus YELECTRON MICROSCOPY3.45
396HXX|1|BbPotato virus YELECTRON MICROSCOPY3.45
406HXX|1|AuPotato virus YELECTRON MICROSCOPY3.45
415ODV|1|iStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
425ODV|1|aStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
435ODV|1|rStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
445ODV|1|bStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
455ODV|1|jStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
465ODV|1|pStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
475ODV|1|cStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
485ODV|1|dStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
495ODV|1|kStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
505ODV|1|eStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
515ODV|1|qStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
525ODV|1|lStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
535ODV|1|oStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
545ODV|1|hStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
555ODV|1|uStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
565ODV|1|tStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
575ODV|1|gStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
585ODV|1|sStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
595ODV|1|wStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
605ODV|1|vStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
615ODV|1|nStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
625ODV|1|xStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
635ODV|1|mStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
645ODV|1|fStructure of Watermelon mosaic virus potyvirus.ELECTRON MICROSCOPY45
655BUD|1|ECrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.995
665BUD|1|DCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.994
674J7L|1|BCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-RAY DIFFRACTION1.85
684J7M|1|BCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-RAY DIFFRACTION1.73
696A4E|1|DTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452
706A4E|1|BTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452
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