NR_4.0_18586.45

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5TBW\|1\|AS (rep)	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
2	5TBW\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
3	4V88\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
4	4V88\|1\|A7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
5	7OSA\|1\|AB	5S ribosomal RNA	5S	Saccharomyces cerevisiae	Eukarya	RF00001	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
6	5I4L\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
7	6HHQ\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
8	5MEI\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
9	5MEI\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
10	5OBM\|1\|7	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
11	6HHQ\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
12	5LYB\|1\|7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
13	5ON6\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
14	5I4L\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
15	5ON6\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
16	5LYB\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
17	5OBM\|1\|3	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
18	5NDW\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
19	7OSM\|1\|AB	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
20	5NDW\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
21	5NDV\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
22	5NDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
23	5NDG\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
24	5NDG\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
25	5TGM\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
26	5TGM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
27	4V7R\|1\|B2	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
28	4V7R\|1\|D2	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
29	5DAT\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
30	5DGV\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
31	5DGF\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
32	5DAT\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
33	5DGE\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
34	5DGV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
35	5TGA\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
36	5DC3\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
37	5DGE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
38	5DC3\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
39	5TGA\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
40	5DGF\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
41	6T4Q\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	Electron microscopy	2.6	2019-12-25
42	7MPJ\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Stm1 bound vacant 80S structure isolated from nop1-D243A	Electron microscopy	2.7	2022-05-11
43	6TB3\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	Electron microscopy	2.8	2020-04-22
44	6SNT\|1\|4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome stalled on SDD1 mRNA.	Electron microscopy	2.8	2020-03-04
45	7AZY\|1\|F	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	Electron microscopy	2.877	2021-05-19
46	4U4R\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
47	4U3U\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
48	6WOO\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	Electron microscopy	2.9	2020-09-23
49	4U4R\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
50	4U3U\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
51	7N8B\|1\|A3	5S ribosomal RNA	5S	Saccharomyces cerevisiae	Eukarya	RF00001	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	2022-05-11
52	7MPI\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Stm1 bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	2022-05-11
53	4U4Q\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
54	4U4Q\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
55	4U3M\|1\|7	5S ribosomal RNA	5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
56	4U52\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
57	4U3M\|1\|3	5S ribosomal RNA	5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
58	6QIK\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.1	2019-06-26
59	7OHQ\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	Electron microscopy	3.1	2021-11-03
60	4U4U\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
61	7BT6\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	Electron microscopy	3.12	2020-10-28
62	6Q8Y\|1\|BR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	2019-03-13
63	6YLG\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	Electron microscopy	3	2020-07-29
64	4U6F\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
65	5T62\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	Electron microscopy	3.1	2017-02-08
66	4U52\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
67	4U4U\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
68	6T7T\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on poly(A) tract.	Electron microscopy	3.1	2019-12-25
69	6XIR\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	Electron microscopy	3.2	2020-08-26
70	6RZZ\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.2	2019-06-26
71	6M62\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	Electron microscopy	3.2	2020-08-26
72	7BTB\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	Electron microscopy	3.22	2020-10-28
73	7RR5\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of ribosomal complex bound with Rbg1/Tma46	Electron microscopy	3.23	2021-11-10
74	6YLH\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Rix1-Rea1 pre-60S particle - full composite structure	Electron microscopy	3.1	2020-07-29
75	4U4N\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
76	4U6F\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
77	6TNU\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	Electron microscopy	3.1	2020-04-22
78	3JCT\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	Electron microscopy	3.08	2016-06-01
79	4U3N\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
80	4U4Z\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
81	4U4N\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
82	6T7I\|1\|C4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	Electron microscopy	3.2	2019-12-25
83	7B7D\|1\|LB	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	Electron microscopy	3.3	2021-03-10
84	6RI5\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.3	2019-06-26
85	6S47\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	2019-07-24
86	4U4Z\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
87	4U55\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
88	4U50\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
89	5M1J\|1\|34	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	2017-01-18
90	4U50\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
91	4U3N\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
92	4U4Y\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
93	4U4Y\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
94	4U51\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
95	6Z6K\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	Electron microscopy	3.4	2020-07-29
96	6Z6J\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	Electron microscopy	3.4	2020-07-29
97	6QT0\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.4	2019-06-26
98	7OH3\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	Electron microscopy	3.4	2021-11-03
99	4U55\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
100	5H4P\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	Electron microscopy	3.07	2017-01-25
101	6SV4\|1\|YR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
102	6SV4\|1\|ZR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
103	4U53\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
104	5APO\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	Electron microscopy	3.41	2015-12-16
105	6QTZ\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.5	2019-06-26
106	6R86\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1-60S ribosomal subunit complex (post-state)	Electron microscopy	3.4	2019-07-31
107	6N8M\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
108	4U51\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
109	4U53\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
110	6SV4\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
111	6N8O\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
112	6N8J\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
113	6R87\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	Electron microscopy	3.4	2019-06-26
114	6HD7\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the ribosome-NatA complex	Electron microscopy	3.4	2018-12-19
115	5JUP\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	2016-10-05
116	6N8K\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	Electron microscopy	3.6	2019-03-13
117	6N8L\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	Electron microscopy	3.6	2019-03-13
118	4U56\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
119	6R84\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	Electron microscopy	3.6	2019-06-26
120	4U56\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
121	6OIG\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	Electron microscopy	3.8	2020-09-30
122	6N8N\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	Electron microscopy	3.8	2019-03-13
123	6S05\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.9	2019-06-26
124	7NRC\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	Electron microscopy	3.9	2021-05-05
125	6GQB\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	2018-07-11
126	5MC6\|1\|BR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	2017-01-18
127	6T83\|1\|Bb	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
128	6T83\|1\|4b	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
129	5JUT\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	2016-10-05
130	6FT6\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	Electron microscopy	3.9	2018-03-28
131	5JUO\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	2016-10-05
132	5JUU\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	2016-10-05
133	6GQV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	2018-07-11
134	5APN\|1\|7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	Electron microscopy	3.91	2015-12-16
135	4U4O\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
136	4U4O\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
137	5GAK\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	Electron microscopy	3.88	2016-02-24
138	7OF1\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	Electron microscopy	3.1	2021-11-03

Release history

Release	3.230	3.231
Date	2022-05-11	2022-05-18

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_18586.45	NR_4.0_18586.44	3.230	(135) 6FT6\|1\|3, 4U53\|1\|7, 6T83\|1\|Bb, 5M1J\|1\|34, 4U4N\|1\|3, 6N8N\|1\|B, 5APN\|1\|7, 7BT6\|1\|3, 5OBM\|1\|7, 4U4Y\|1\|7, 6RZZ\|1\|x, 5DGV\|1\|7, 7B7D\|1\|LB, 5OBM\|1\|3, 4U4Y\|1\|3, 6RI5\|1\|x, 5DGV\|1\|3, 6T83\|1\|4b, 5LYB\|1\|7, 4U3U\|1\|7, 6N8M\|1\|B, 4V88\|1\|A7, 5TGM\|1\|7, 4U53\|1\|3, 7AZY\|1\|F, 5NDW\|1\|7, 4U4U\|1\|7, 6R87\|1\|3, 5DGF\|1\|7, 6T7T\|1\|C4, 5LYB\|1\|3, 4U3U\|1\|3, 6N8L\|1\|2, 4V88\|1\|A3, 5TGM\|1\|3, 4U52\|1\|7, 7RR5\|1\|C4, 6Z6K\|1\|C4, 5NDW\|1\|3, 4U4U\|1\|3, 6R86\|1\|3, 5DGF\|1\|3, 6T7I\|1\|C4, 5JUU\|1\|D, 4U3N\|1\|7, 6N8K\|1\|2, 4V7R\|1\|D2, 5TGA\|1\|7, 4U52\|1\|3, 6T4Q\|1\|C4, 7OSM\|1\|AB, 6Z6J\|1\|C4, 5NDV\|1\|7, 4U4R\|1\|7, 6R84\|1\|3, 5DGE\|1\|7, 5JUT\|1\|D, 4U3N\|1\|3, 6N8J\|1\|2, 4V7R\|1\|B2, 4U51\|1\|7, 6SV4\|1\|ZR, 7OSA\|1\|AB, 5TGA\|1\|3, 6YLH\|1\|3, 5NDV\|1\|3, 4U4R\|1\|3, 6QTZ\|1\|x, 5DGE\|1\|3, 5JUP\|1\|D, 4U3M\|1\|7, 6M62\|1\|3, 4U6F\|1\|7, 4U51\|1\|3, 6SV4\|1\|YR, 5JUO\|1\|D, 7OHQ\|1\|3, 5TBW\|1\|AS, 6YLG\|1\|3, 5NDG\|1\|7, 4U4Q\|1\|7, 6QT0\|1\|x, 5DC3\|1\|7, 4U3M\|1\|3, 6HHQ\|1\|AS, 4U6F\|1\|3, 4U50\|1\|7, 6SV4\|1\|BR, 5I4L\|1\|7, 7OH3\|1\|3, 5TBW\|1\|3, 6XIR\|1\|3, 5NDG\|1\|3, 4U4Q\|1\|3, 6QIK\|1\|x, 5DC3\|1\|3, 3JCT\|1\|3, 6HHQ\|1\|3, 4U56\|1\|7, 5I4L\|1\|3, 7OF	(3) 7N8B\|1\|A3, 7MPJ\|1\|A3, 7MPI\|1\|A3	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_18586.45	NR_4.0_18586.46	3.232	(138) 7OHQ\|1\|3, 4U3U\|1\|7, 6N8O\|1\|B, 5I4L\|1\|7, 4U4R\|1\|7, 6R87\|1\|3, 5MC6\|1\|BR, 4U50\|1\|7, 6SV4\|1\|ZR, 5NDW\|1\|7, 4U55\|1\|7, 6WOO\|1\|7, 5TGA\|1\|3, 4V88\|1\|A7, 7BT6\|1\|3, 6HHQ\|1\|3, 5DGE\|1\|7, 4U3U\|1\|3, 5I4L\|1\|3, 4U4R\|1\|3, 5M1J\|1\|34, 4U50\|1\|3, 5NDW\|1\|3, 4U55\|1\|3, 5TBW\|1\|AS, 4V88\|1\|A3, 5DGE\|1\|3, 7OH3\|1\|3, 6N8N\|1\|B, 6R86\|1\|3, 6SV4\|1\|YR, 6TNU\|1\|BR, 7B7D\|1\|LB, 6HD7\|1\|3, 4U3N\|1\|7, 5H4P\|1\|3, 4U4Q\|1\|7, 5LYB\|1\|7, 4U4Z\|1\|7, 5NDV\|1\|7, 4U53\|1\|7, 5TBW\|1\|3, 4V7R\|1\|D2, 5DC3\|1\|7, 6N8M\|1\|B, 6R84\|1\|3, 6SV4\|1\|BR, 6TB3\|1\|BR, 7AZY\|1\|F, 6GQV\|1\|3, 7OF1\|1\|3, 4U3N\|1\|3, 5GAK\|1\|3, 4U4Q\|1\|3, 5LYB\|1\|3, 4U4Z\|1\|3, 5NDV\|1\|3, 4U53\|1\|3, 5T62\|1\|B, 4V7R\|1\|B2, 6GQB\|1\|3, 5DC3\|1\|3, 6N8L\|1\|2, 6QTZ\|1\|x, 6SNT\|1\|4, 6T83\|1\|Bb, 6Z6K\|1\|C4, 7NRC\|1\|LB, 5DGV\|1\|7, 4U4O\|1\|7, 5JUU\|1\|D, 4U4Y\|1\|7, 5NDG\|1\|7, 4U52\|1\|7, 5ON6\|1\|AS, 4U6F\|1\|7, 6FT6\|1\|3, 5DAT\|1\|7, 4U3M\|1\|7, 6N8K\|1\|2, 6QT0\|1\|x, 6S47\|1\|AB, 6T83\|1\|4b, 6Z6J\|1\|C4, 7N8B\|1\|A3, 5DGV\|1\|3, 4U4O\|1\|3, 5JUT\|1\|D, 4U4Y\|1\|3, 5NDG\|1\|3, 4U52\|1\|3, 5ON6\|1\|3, 4U6F\|1\|3, 5TGM\|1\|7, 5DAT\|1\|3, 4U3M\|1\|3, 6N8J\|1\|2, 7RR5\|1\|C4, 6QIK\|1\|x, 6S05\|1\|x, 6T	(0)	(2) 7TOP\|1\|A5S, 7TOO\|1\|A5S

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	7OF1\|1\|3	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	ELECTRON MICROSCOPY	3.1	43
2	6N8J\|1\|2	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
3	5H4P\|1\|3	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	ELECTRON MICROSCOPY	3.07	121
4	6GQV\|1\|3	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	121
5	6GQB\|1\|3	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	121
6	6N8O\|1\|B	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
7	6N8M\|1\|B	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
8	6N8N\|1\|B	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.8	121
9	6N8L\|1\|2	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	121
10	6N8K\|1\|2	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	121
11	5T62\|1\|B	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	ELECTRON MICROSCOPY	3.1	121
12	6S05\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.9	121
13	6QIK\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.1	121
14	6RZZ\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.2	121
15	5OBM\|1\|3	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	121
16	5OBM\|1\|7	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	121
17	6QT0\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.4	121
18	5M1J\|1\|34	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	121
19	6XIR\|1\|3	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	121
20	6QTZ\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.5	121
21	6RI5\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.3	121
22	7RR5\|1\|C4	Structure of ribosomal complex bound with Rbg1/Tma46	ELECTRON MICROSCOPY	3.23	121
23	7NRC\|1\|LB	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	ELECTRON MICROSCOPY	3.9	121
24	6TNU\|1\|BR	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	121
25	7B7D\|1\|LB	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	121
26	5MC6\|1\|BR	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	121
27	5APN\|1\|7	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	ELECTRON MICROSCOPY	3.91	121
28	5APO\|1\|7	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	ELECTRON MICROSCOPY	3.41	121
29	5TGM\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	121
30	5DGF\|1\|3	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	121
31	5DGE\|1\|3	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	121
32	5DC3\|1\|3	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	121
33	5DGV\|1\|3	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	121
34	5LYB\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	121
35	5TGA\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	121
36	5I4L\|1\|3	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
37	4U53\|1\|3	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
38	4U50\|1\|3	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
39	4U6F\|1\|3	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
40	4U3N\|1\|3	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
41	4U4Y\|1\|3	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
42	4U51\|1\|3	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
43	4U55\|1\|3	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
44	4U4N\|1\|3	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
45	4U4Z\|1\|3	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
46	4U4R\|1\|3	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	121
47	4V88\|1\|A3	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	121
48	4U3U\|1\|3	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	121
49	4U3M\|1\|3	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
50	4U4U\|1\|3	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
51	4U4Q\|1\|3	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
52	6HHQ\|1\|3	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
53	5TBW\|1\|3	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
54	5ON6\|1\|3	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	121
55	4U52\|1\|3	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
56	4U56\|1\|3	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	121
57	5DAT\|1\|3	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	121
58	5MEI\|1\|3	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	121
59	5NDG\|1\|3	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
60	5NDW\|1\|3	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
61	4U4O\|1\|3	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	121
62	5NDV\|1\|3	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
63	5NDV\|1\|7	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
64	5TBW\|1\|AS	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
65	6HHQ\|1\|AS	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
66	5ON6\|1\|AS	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	121
67	5MEI\|1\|AS	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	121
68	4U4O\|1\|7	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	121
69	5TGM\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	121
70	5DGE\|1\|7	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	121
71	5DC3\|1\|7	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	121
72	5DGV\|1\|7	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	121
73	4U6F\|1\|7	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
74	5DGF\|1\|7	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	121
75	5DAT\|1\|7	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	121
76	4U52\|1\|7	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
77	4U50\|1\|7	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
78	4U51\|1\|7	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
79	4U53\|1\|7	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
80	4U4U\|1\|7	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
81	4U4Q\|1\|7	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
82	4U4N\|1\|7	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
83	4U4Z\|1\|7	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
84	4U3N\|1\|7	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
85	4U55\|1\|7	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
86	4U4Y\|1\|7	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
87	4U3M\|1\|7	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
88	4U4R\|1\|7	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	121
89	4U3U\|1\|7	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	121
90	4V88\|1\|A7	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	121
91	5I4L\|1\|7	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
92	5LYB\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	121
93	5TGA\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	121
94	4U56\|1\|7	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	121
95	5NDG\|1\|7	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
96	5NDW\|1\|7	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
97	6WOO\|1\|7	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	121
98	7MPI\|1\|A3	Stm1 bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	121
99	7N8B\|1\|A3	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	121
100	7MPJ\|1\|A3	Stm1 bound vacant 80S structure isolated from nop1-D243A	ELECTRON MICROSCOPY	2.7	120
101	7AZY\|1\|F	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	ELECTRON MICROSCOPY	2.877	121
102	6Q8Y\|1\|BR	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	121
103	6Z6J\|1\|C4	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	121
104	6Z6K\|1\|C4	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	121
105	6S47\|1\|AB	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	121
106	6TB3\|1\|BR	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	121
107	6T4Q\|1\|C4	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	121
108	6SNT\|1\|4	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	121
109	6T7T\|1\|C4	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	121
110	6T7I\|1\|C4	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	121
111	6T83\|1\|4b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	121
112	6T83\|1\|Bb	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	121
113	6SV4\|1\|BR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
114	6SV4\|1\|ZR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
115	6SV4\|1\|YR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
116	6R87\|1\|3	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	ELECTRON MICROSCOPY	3.4	121
117	6R84\|1\|3	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	ELECTRON MICROSCOPY	3.6	121
118	6R86\|1\|3	Yeast Vms1-60S ribosomal subunit complex (post-state)	ELECTRON MICROSCOPY	3.4	121
119	7OSA\|1\|AB	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	121
120	7OSM\|1\|AB	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	121
121	5JUP\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	121
122	5JUU\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
123	5JUT\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
124	5JUO\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
125	5GAK\|1\|3	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	ELECTRON MICROSCOPY	3.88	121
126	6HD7\|1\|3	Cryo-EM structure of the ribosome-NatA complex	ELECTRON MICROSCOPY	3.4	121
127	3JCT\|1\|3	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	ELECTRON MICROSCOPY	3.08	121
128	7BTB\|1\|3	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	ELECTRON MICROSCOPY	3.22	121
129	6FT6\|1\|3	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	ELECTRON MICROSCOPY	3.9	121
130	6OIG\|1\|7	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	ELECTRON MICROSCOPY	3.8	121
131	6YLG\|1\|3	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	ELECTRON MICROSCOPY	3	117
132	6YLH\|1\|3	Rix1-Rea1 pre-60S particle - full composite structure	ELECTRON MICROSCOPY	3.1	117
133	7BT6\|1\|3	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	ELECTRON MICROSCOPY	3.12	121
134	7OH3\|1\|3	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	ELECTRON MICROSCOPY	3.4	121
135	7OHQ\|1\|3	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	ELECTRON MICROSCOPY	3.1	121
136	6M62\|1\|3	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	ELECTRON MICROSCOPY	3.2	121
137	4V7R\|1\|B2	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	121
138	4V7R\|1\|D2	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	121

Equivalence class NR_4.0_18586.45 Obsolete

Release history

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