#IFECompound(s)RNA source organismTitleMethodResolutionDate
16J6G|1|D (rep)U5 snRNA, ACT1 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromELECTRON MICROSCOPY3.22019-04-24
26BK8|1|5U5 snRNA, RNA (34-MER)Saccharomyces cerevisiaeS. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.32018-02-21
35GMK|1|DU5 snRNA, 5'-ExonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.42016-08-17
45Y88|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromELECTRON MICROSCOPY3.462018-08-01
56EXN|1|5U5 snRNA, Ligated exons: UBC4 mRNASaccharomyces cerevisiaePost-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.72018-01-17
65YLZ|1|BU5 snRNA, mRNA/intron lariat, U2 snRNASaccharomyces cerevisiaeCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.62018-07-18
76J6H|1|DU5 snRNA, ACT1 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromELECTRON MICROSCOPY3.62019-04-24
85LJ3|1|UU5 snRNA (small nuclear RNA), Exon 1 (5' exon) of UBC4 pre-mRNASaccharomyces cerevisiaeStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.82016-08-03
95ZWM|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.42018-08-29
105GAN|1|UU5 snRNASaccharomyces cerevisiaeThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.72016-01-27
115MPS|1|5U5 snRNA, UBC4 gene exonSaccharomyces cerevisiaeStructure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.852017-01-18
126J6N|1|DU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromELECTRON MICROSCOPY3.862019-04-24
136J6Q|1|DU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromELECTRON MICROSCOPY3.72019-04-24
145WSG|1|DU5 snRNA, 5'-exonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY42017-01-25
155GAM|1|UU5 snRNASaccharomyces cerevisiaeFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.72016-02-03
165ZWO|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.92018-08-29
173JCM|1|FSNR7-L snRNA, SNR6 snRNA, pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.82016-02-24

Release history

Release3.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.95
Date2019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_30457.11NR_4.0_30457.103.71(13) 5Y88|1|B, 5WSG|1|D, 5MPS|1|5, 5LJ3|1|U, 6EXN|1|5, 5GMK|1|D, 6BK8|1|5, 5GAN|1|U, 5ZWO|1|B, 5GAM|1|U, 5ZWM|1|B, 3JCM|1|F, 5YLZ|1|B(4) 6J6G|1|D, 6J6Q|1|D, 6J6N|1|D, 6J6H|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15MPS|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.85141
25LJ3|1|UStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8141
35Y88|1|BCryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromELECTRON MICROSCOPY3.46117
45GMK|1|DCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4117
55WSG|1|DCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4117
65YLZ|1|BCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.6117
76BK8|1|5S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3103
86J6Q|1|DCryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromELECTRON MICROSCOPY3.7179
96J6N|1|DCryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromELECTRON MICROSCOPY3.86179
106J6G|1|DCryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromELECTRON MICROSCOPY3.2179
116J6H|1|DCryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromELECTRON MICROSCOPY3.6179
126EXN|1|5Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7171
135ZWO|1|BCryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.9175
145ZWM|1|BCryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.4175
153JCM|1|FCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.8113
165GAM|1|UFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.7141
175GAN|1|UThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.7141