#IFECompound(s)RNA source organismTitleMethodResolutionDate
16J6G|1|D (rep)U5 snRNA, ACT1 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromELECTRON MICROSCOPY3.22019-04-24
26BK8|1|5U5 snRNA, RNA (34-MER)Saccharomyces cerevisiaeS. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.32018-02-21
35GMK|1|DU5 snRNA, 5'-ExonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.42016-08-17
45Y88|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromELECTRON MICROSCOPY3.462018-08-01
56EXN|1|5U5 snRNA, Ligated exons: UBC4 mRNASaccharomyces cerevisiaePost-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.72018-01-17
65YLZ|1|BU5 snRNA, mRNA/intron lariat, U2 snRNASaccharomyces cerevisiaeCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.62018-07-18
76J6H|1|DU5 snRNA, ACT1 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromELECTRON MICROSCOPY3.62019-04-24
85LJ3|1|UU5 snRNA (small nuclear RNA), Exon 1 (5' exon) of UBC4 pre-mRNASaccharomyces cerevisiaeStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.82016-08-03
95ZWM|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.42018-08-29
105GAN|1|UU5 snRNASaccharomyces cerevisiaeThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.72016-01-27
115MPS|1|5U5 snRNA, UBC4 gene exonSaccharomyces cerevisiaeStructure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.852017-01-18
126J6N|1|DU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromELECTRON MICROSCOPY3.862019-04-24
136J6Q|1|DU5 snRNA, UBC4 pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromELECTRON MICROSCOPY3.72019-04-24
145WSG|1|DU5 snRNA, 5'-exonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY42017-01-25
155GAM|1|UU5 snRNASaccharomyces cerevisiaeFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.72016-02-03
165ZWO|1|BU5 snRNASaccharomyces cerevisiaeCryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.92018-08-29
173JCM|1|FSNR7-L snRNA, SNR6 snRNA, pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.82016-02-24

Release history

Release3.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.98
Date2019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_30457.11NR_4.0_30457.103.71(13) 5GAN|1|U, 5ZWO|1|B, 5GAM|1|U, 5ZWM|1|B, 3JCM|1|F, 5YLZ|1|B, 5Y88|1|B, 5WSG|1|D, 5MPS|1|5, 5LJ3|1|U, 6EXN|1|5, 5GMK|1|D, 6BK8|1|5(4) 6J6G|1|D, 6J6Q|1|D, 6J6N|1|D, 6J6H|1|D(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13JCM|1|FCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.8113
25ZWM|1|BCryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.4175
35ZWO|1|BCryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.9175
46EXN|1|5Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7171
56J6H|1|DCryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstromELECTRON MICROSCOPY3.6179
66J6G|1|DCryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstromELECTRON MICROSCOPY3.2179
76J6N|1|DCryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstromELECTRON MICROSCOPY3.86179
86J6Q|1|DCryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstromELECTRON MICROSCOPY3.7179
96BK8|1|5S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3103
105YLZ|1|BCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.6117
115WSG|1|DCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4117
125GMK|1|DCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4117
135Y88|1|BCryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstromELECTRON MICROSCOPY3.46117
145MPS|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.85141
155LJ3|1|UStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8141
165GAN|1|UThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.7141
175GAM|1|UFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.7141