#IFECompound(s)RNA source organismTitleMethodResolutionDate
13U5H|5 (rep)The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome BX-RAY DIFFRACTION32011-12-21
21VW7|AS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II). This entry contains the large subunit ribosomal RNA.ELECTRON MICROSCOPY6.12014-06-11
31VWS|AS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I). This entry contains the large subunit ribosomal RNA.ELECTRON MICROSCOPY6.12014-06-11
41VXU|2Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA, entry contains the large ribosomal subunit RNA)ELECTRON MICROSCOPY6.22014-08-06
51VXX|2Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs, this entry contains the large ribosomal subunit RNA)ELECTRON MICROSCOPY6.32014-08-06
63IZF|AModel of the large subunit RNA based on a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome (with ES27L-in conformation)ELECTRON MICROSCOPY8.82010-12-01
73JYX|5Structure of the 60S rRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolutionELECTRON MICROSCOPY8.92009-12-22
83O58|1Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.X-RAY DIFFRACTION42010-12-15
93O5H|1Yeast 80S ribosome. This entry consists of the 60S subunit of the second 80S in the asymmetric unit.X-RAY DIFFRACTION42010-12-15
103U5D|1The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome AX-RAY DIFFRACTION32011-12-21
114B6B|5Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1ELECTRON MICROSCOPY8.12012-10-31
124BYP|5Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY4.32013-11-20
134BYW|5Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY6.62013-11-20
144CUV|1Kluyveromyces lactis 80S ribosome in complex with CrPV-IRESELECTRON MICROSCOPY3.72014-05-14
154UJG|ACrystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
164UJI|ICrystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
174UJL|ACrystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
184UJN|ICrystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
194UJQ|ACrystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.82014-10-22
204UJS|ICrystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.82014-10-22
214UJV|ACrystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
224UJX|ICrystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
234UK0|ACrystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
244UK2|ICrystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
254UK5|ACrystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
264UK7|ICrystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
274UKA|ACrystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.92014-10-22
284UKC|ICrystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.92014-10-22
294UKG|ACrystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.452014-10-22
304UKI|ICrystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.452014-10-22
314UKL|ACrystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
324UKN|ICrystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
334UKQ|ACrystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.32014-10-22
344UKS|ICrystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.32014-10-22
354UKV|ACrystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
364UKX|ICrystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
374UL0|ACrystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.62014-10-22
384UL2|ICrystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.62014-10-22
394UL5|ACrystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
404UL7|ICrystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
414ULA|ACrystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
424ULC|ICrystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
434ULF|ACrystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
444ULH|ICrystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
454ULK|ACrystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
464ULN|ICrystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
474ULQ|ACrystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
484ULS|ICrystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22

Release history

Release1.831.841.851.861.871.881.89
Date2014-10-242014-10-312014-11-072014-11-142014-11-212014-11-282014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength