#PDBTitleRNA source organismCompoundsMethodResolutionDate
11J8G|1|D (rep)X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3'X-RAY DIFFRACTION0.612001-11-23
24RKV|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION0.882014-11-19
34RNE|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
44RNE|1|FStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
51J8G|1|AX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3'X-RAY DIFFRACTION0.612001-11-23
64RJ1|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION0.922014-11-12
74RNE|1|BStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
81J8G|1|CX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3', 5'-R(*UP*GP*GP*GP*GP*U)-3'X-RAY DIFFRACTION0.612001-11-23
94XK0|1|CCrystal structure of a tetramolecular RNA G-quadruplex in potassiumsynthetic constructRNA (5'-(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.082015-02-11
104RNE|1|CStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
114RNE|1|DStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
124RNE|1|EStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
134RNE|1|GStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19
144RNE|1|HStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionssynthetic constructRNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), RNA (5'-R(*UP*GP*GP*GP*GP*U)-3')X-RAY DIFFRACTION1.012014-11-19

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.146
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_31074.1NR_4.0_74981.12.93(14) 1J8G|1|A, 4RNE|1|D, 4RNE|1|C, 4RNE|1|B, 4RKV|1|A, 4RNE|1|H, 4RJ1|1|A, 4RNE|1|G, 1J8G|1|D, 4RNE|1|F, 1J8G|1|C, 4RNE|1|E, 4RNE|1|A, 4XK0|1|C(0) (4) 4RKV|1|B, 4RJ1|1|B, 1J8G|1|B, 4XK0|1|A

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11J8G|1|DX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
24RJ1|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION0.926
31J8G|1|CX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
44RNE|1|HStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
54RNE|1|GStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
64RNE|1|DStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
74RKV|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION0.8810
84RNE|1|CStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
94RNE|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.019
104RNE|1|FStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.019
114RNE|1|EStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
124RNE|1|BStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
131J8G|1|AX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
144XK0|1|CCrystal structure of a tetramolecular RNA G-quadruplex in potassiumX-RAY DIFFRACTION1.086