Equivalence class NR_4.0_31167.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6YSI|1|5 (rep) | 5S ribosomal RNA | 5S ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | Electron microscopy | 2.5 | 115 | 2020-09-16 |
| 2 | 6YHS|1|5 | 5S ribosomal RNA | 5S ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | Electron microscopy | 2.7 | 115 | 2020-09-16 |
| 3 | 6V3A|1|B | 5S ribosomal RNA | 5s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | Electron microscopy | 2.82 | 115 | 2020-02-05 |
| 4 | 6V3B|1|B | 5S ribosomal RNA | 5s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | Electron microscopy | 2.91 | 115 | 2020-02-05 |
| 5 | 6V3D|1|B | 5S ribosomal RNA | 5s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | Electron microscopy | 2.95 | 115 | 2020-02-05 |
| 6 | 6V39|1|B | 5S ribosomal RNA | 5s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF00001 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | Electron microscopy | 3.04 | 115 | 2020-02-05 |
Release history
| Release | 3.144 | 3.145 | 3.146 | 3.147 | 3.148 | 3.149 | 3.150 | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 | 3.156 | 3.157 | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-09-16 | 2020-09-23 | 2020-09-30 | 2020-10-07 | 2020-10-14 | 2020-10-21 | 2020-10-28 | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 | 2020-12-09 | 2020-12-16 | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6V39|1|B | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | ELECTRON MICROSCOPY | 3.04 | 115 | |
| 2 | 6V3A|1|B | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | ELECTRON MICROSCOPY | 2.82 | 115 | |
| 3 | 6V3B|1|B | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | ELECTRON MICROSCOPY | 2.91 | 115 | |
| 4 | 6V3D|1|B | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | ELECTRON MICROSCOPY | 2.95 | 115 | |
| 5 | 6YHS|1|5 | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | ELECTRON MICROSCOPY | 2.7 | 115 | |
| 6 | 6YSI|1|5 | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | ELECTRON MICROSCOPY | 2.5 | 115 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: