Equivalence class NR_4.0_31492.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2NR0|1|E (rep) | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 2 | 2NR0|1|G | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 3 | 2NR0|1|H | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 4 | 2NRE|1|F | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 4 | 2007-05-15 | ||
| 5 | 4V8C|1|CB | Transfer RNA | TRNA-LEU, MRNA | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 | ||
| 6 | 4V8B|1|AB | Transfer RNA | TRNA-LEU, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 7 | 2NR0|1|F | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 8 | 4V8C|1|DB | Transfer RNA | TRNA-LEU, MRNA | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 | ||
| 9 | 4V8B|1|CB | Transfer RNA | TRNA-LEU, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 10 | 4V87|1|BB | Transfer RNA | TRNA-LEU, MRNA | synthetic construct | Synthetic | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
| 11 | 4V87|1|CB | Transfer RNA | TRNA-LEU, MRNA | synthetic construct | Synthetic | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
Release history
| Release | 2.0 | 2.1 | 2.2 | 2.3 | 2.4 | 2.5 | 2.6 | 2.7 | 2.8 | 2.9 | 2.10 | 2.11 | 2.12 | 2.13 | 2.14 | 2.15 | 2.16 | 2.17 | 2.18 | 2.19 | 2.20 | 2.21 | 2.22 | 2.23 | 2.24 | 2.25 | 2.26 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2014-12-05 | 2014-12-12 | 2014-12-19 | 2014-12-26 | 2015-01-02 | 2015-01-09 | 2015-01-16 | 2015-01-23 | 2015-01-30 | 2015-02-06 | 2015-02-13 | 2015-02-20 | 2015-02-27 | 2015-03-06 | 2015-03-13 | 2015-03-20 | 2015-03-27 | 2015-04-03 | 2015-04-10 | 2015-04-17 | 2015-04-24 | 2015-05-01 | 2015-05-08 | 2015-05-15 | 2015-05-22 | 2015-05-29 | 2015-06-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4V8B|1|CB | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 87 |
| 2 | 4V87|1|CB | Crystal structure analysis of ribosomal decoding. | X-RAY DIFFRACTION | 3.1 | 87 |
| 3 | 4V8C|1|DB | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-RAY DIFFRACTION | 3.3 | 87 |
| 4 | 4V87|1|BB | Crystal structure analysis of ribosomal decoding. | X-RAY DIFFRACTION | 3.1 | 87 |
| 5 | 4V8B|1|AB | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 87 |
| 6 | 4V8C|1|CB | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-RAY DIFFRACTION | 3.3 | 87 |
| 7 | 2NR0|1|G | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 67 |
| 8 | 2NR0|1|F | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 74 |
| 9 | 2NR0|1|H | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 65 |
| 10 | 2NR0|1|E | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 81 |
| 11 | 2NRE|1|F | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 4 | 56 |