Equivalence class NR_4.0_33675.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6YDP|1|BB (rep) | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | Electron microscopy | 3 | 2020-07-15 |
| 2 | 7NSH|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2 | Electron microscopy | 3.2 | 2021-05-05 |
| 3 | 6GAW|1|BB | Transfer RNA | tRNA-Phe, mitochondrial | Sus scrofa | Mitochondria | RF00005 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | Electron microscopy | 3.2 | 2018-08-22 |
| 4 | 6GB2|1|BB | Transfer RNA | CP tRNAPhe, mitochondrial | Sus scrofa | Mitochondria | RF00005 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit. | Electron microscopy | 3.2 | 2018-08-08 |
| 5 | 7NQL|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | Electron microscopy | 3.4 | 2021-05-05 |
| 6 | 7NQH|1|BB | Transfer RNA | tRNA(Phe) in LSU | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | Electron microscopy | 3.5 | 2021-05-05 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6GB2|1|BB | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit. | ELECTRON MICROSCOPY | 3.2 | 67 |
| 2 | 6GAW|1|BB | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | ELECTRON MICROSCOPY | 3.2 | 67 |
| 3 | 7NQH|1|BB | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | ELECTRON MICROSCOPY | 3.5 | 67 |
| 4 | 7NQL|1|BB | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | ELECTRON MICROSCOPY | 3.4 | 67 |
| 5 | 6YDP|1|BB | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | ELECTRON MICROSCOPY | 3 | 67 |
| 6 | 7NSH|1|BB | 39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2 | ELECTRON MICROSCOPY | 3.2 | 67 |