Equivalence class NR_4.0_34640.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6KE6|1|SA+ 6KE6|1|5A+ 6KE6|1|3A (rep) | Small subunit ribosomal RNA + U3 small nucleolar RNA | 18S rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Eukarya | RF01960 + RF01846 | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | Electron microscopy | 3.4 | 2020-08-05 |
| 2 | 5WLC|1|L1+ 5WLC|1|L0+ 5WLC|1|L2 | Small subunit ribosomal RNA + U3 small nucleolar RNA | 18S pre-rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Eukarya | RF01960 + RF01846 | The complete structure of the small subunit processome | Electron microscopy | 3.8 | 2017-09-27 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_34640.2 | NR_4.0_34640.1 | 3.138 | (1) 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2 | (1) 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_34640.2 | NR_4.0_33014.1 | 3.144 | (2) 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A, 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2 | (0) | (3) 6LQU|1|SA+6LQU|1|5A+6LQU|1|3A, 6LQS|1|SA, 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | ELECTRON MICROSCOPY | 3.4 | 1310 |
| 2 | 5WLC|1|L1+5WLC|1|L0+5WLC|1|L2 | The complete structure of the small subunit processome | ELECTRON MICROSCOPY | 3.8 | 1025 |