#IFECompound(s)RNA source organismTitleMethodResolutionDate
15J01|1|A (rep)group II intron lariatOceanobacillus iheyensisStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+.X-RAY DIFFRACTION3.392016-12-14
24FAW|1|AGroup IIC intron, 5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragmentX-RAY DIFFRACTION2.72012-11-14
34FAU|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.872012-11-14
44Y1O|1|Agroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.952015-10-14
55J02|1|AGROUP II INTRON LARIAT, 5' EXON ANALOG (5'-R(*CP*UP*GP*UP*UP*AP*(5MU))-3')Oceanobacillus iheyensisStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.X-RAY DIFFRACTION3.492016-12-14
64Y1N|1|Agroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION32015-10-14
73G78|1|AGroup II intron, Ligated EXON productOceanobacillus iheyensisInsight into group II intron catalysis from revised crystal structureX-RAY DIFFRACTION2.82010-02-16
83IGI|1|AGroup IIC intron, 5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3'Tertiary Architecture of the Oceanobacillus Iheyensis Group II IntronX-RAY DIFFRACTION3.122009-12-22
94Y1N|1|Bgroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION32015-10-14
104E8Q|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+X-RAY DIFFRACTION2.842012-11-14
114E8N|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+X-RAY DIFFRACTION2.962012-11-14
124E8K|1|AGroup IIC intron, 5'-R(*CP*G*AP*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrateX-RAY DIFFRACTION3.032012-11-14
134FAR|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.862012-11-14
144Y1O|1|Bgroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.952015-10-14
154E8T|1|AGroup IIC intron, 5'-R(*AP*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)X-RAY DIFFRACTION3.342012-11-14
164FB0|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.222012-11-14
174E8P|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+X-RAY DIFFRACTION3.282012-11-14
184FAQ|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exonX-RAY DIFFRACTION3.112012-11-14
193BWP|1|AGroup IIC intronCrystal structure of a self-spliced group II intronX-RAY DIFFRACTION3.12008-04-15
204E8R|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+X-RAY DIFFRACTION3.362012-11-14
214DS6|1|AMutant Group IIC IntronOceanobacillus iheyensisCrystal structure of a group II intron in the pre-catalytic stateX-RAY DIFFRACTION3.642012-04-18
224E8M|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.52012-11-14
233EOH|1|AGroup IIC intron, 5'-R(*UP*UP*AP*UP*UP*A)-3'Refined group II intron structureX-RAY DIFFRACTION3.122008-10-28
244FAX|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+X-RAY DIFFRACTION3.12012-11-14
253EOG|1|AGroup IIC intron, 5'-R(*UP*UP*AP*UP*UP*A)-3'Co-crystallization showing exon recognition by a group II intronX-RAY DIFFRACTION3.392008-10-28
264E8V|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+X-RAY DIFFRACTION3.992012-11-14

Release history

Release2.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.23
Date2016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-25

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13EOG|1|ACo-crystallization showing exon recognition by a group II intronX-RAY DIFFRACTION3.39388
23BWP|1|ACrystal structure of a self-spliced group II intronX-RAY DIFFRACTION3.1356
33EOH|1|ARefined group II intron structureX-RAY DIFFRACTION3.12381
43G78|1|AInsight into group II intron catalysis from revised crystal structureX-RAY DIFFRACTION2.8389
53IGI|1|ATertiary Architecture of the Oceanobacillus Iheyensis Group II IntronX-RAY DIFFRACTION3.12389
64E8T|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)X-RAY DIFFRACTION3.34388
74E8K|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrateX-RAY DIFFRACTION3.03388
84FAQ|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exonX-RAY DIFFRACTION3.11396
94E8V|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+X-RAY DIFFRACTION3.99389
104FB0|1|AStructure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.22393
114E8M|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.5394
124E8P|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+X-RAY DIFFRACTION3.28393
134E8N|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+X-RAY DIFFRACTION2.96393
144E8Q|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+X-RAY DIFFRACTION2.84393
154E8R|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+X-RAY DIFFRACTION3.36393
164FAX|1|AStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+X-RAY DIFFRACTION3.1392
174FAW|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragmentX-RAY DIFFRACTION2.7390
184FAR|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.86390
194FAU|1|AStructure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.87395
204DS6|1|ACrystal structure of a group II intron in the pre-catalytic stateX-RAY DIFFRACTION3.64393
215J02|1|AStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.X-RAY DIFFRACTION3.49414
224Y1O|1|BOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.95256
234Y1N|1|AOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION3249
245J01|1|AStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+.X-RAY DIFFRACTION3.39414
254Y1N|1|BOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION3259
264Y1O|1|AOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.95258