#IFECompound(s)RNA source organismTitleMethodResolutionDate
13IGI|1|A (rep)Group IIC intron, 5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3'Tertiary Architecture of the Oceanobacillus Iheyensis Group II IntronX-RAY DIFFRACTION3.122009-12-22
25J02|1|AGROUP II INTRON LARIAT, 5' EXON ANALOG (5'-R(*CP*UP*GP*UP*UP*AP*(5MU))-3')Oceanobacillus iheyensisStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.X-RAY DIFFRACTION3.492016-12-14
34FAX|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+X-RAY DIFFRACTION3.12012-11-14
44FAR|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.862012-11-14
54E8N|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+X-RAY DIFFRACTION2.962012-11-14
66T3S|1|AGroup IIC Intron RibozymeOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exonX-RAY DIFFRACTION3.282020-05-13
74FAU|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exonX-RAY DIFFRACTION2.872012-11-14
84FB0|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.222012-11-14
94E8K|1|AGroup IIC intron, 5'-R(*CP*G*AP*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrateX-RAY DIFFRACTION3.032012-11-14
104E8Q|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+X-RAY DIFFRACTION2.842012-11-14
114Y1O|1|Agroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.952015-10-14
124Y1O|1|Bgroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1X-RAY DIFFRACTION2.952015-10-14
136T3N|1|AGroup IIC Intron RibozymeOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exonX-RAY DIFFRACTION3.222020-05-13
144E8P|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+X-RAY DIFFRACTION3.282012-11-14
154E8T|1|AGroup IIC intron, 5'-R(*AP*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)X-RAY DIFFRACTION3.342012-11-14
165J01|1|Agroup II intron lariatOceanobacillus iheyensisStructure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+.X-RAY DIFFRACTION3.392016-12-14
174FAW|1|AGroup IIC intron, 5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3'Oceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragmentX-RAY DIFFRACTION2.72012-11-14
183EOH|1|AGroup IIC intron, 5'-R(*UP*UP*AP*UP*UP*A)-3'Refined group II intron structureX-RAY DIFFRACTION3.122008-10-28
196T3R|1|AGroup IIC Intron RibozymeOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exonX-RAY DIFFRACTION3.572020-05-13
204FAQ|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exonX-RAY DIFFRACTION3.112012-11-14
214E8R|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+X-RAY DIFFRACTION3.362012-11-14
224Y1N|1|Bgroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION32015-10-14
233G78|1|AGroup II intron, Ligated EXON productOceanobacillus iheyensisInsight into group II intron catalysis from revised crystal structureX-RAY DIFFRACTION2.82010-02-16
244E8M|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+X-RAY DIFFRACTION3.52012-11-14
256T3K|1|AGroup IIC Intron RibozymeOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exonX-RAY DIFFRACTION3.442020-05-13
264Y1N|1|Agroup II intron, domain 1Oceanobacillus iheyensisOceanobacillus iheyensis group II intron domain 1 with iridium hexamineX-RAY DIFFRACTION32015-10-14
274DS6|1|AMutant Group IIC IntronOceanobacillus iheyensisCrystal structure of a group II intron in the pre-catalytic stateX-RAY DIFFRACTION3.642012-04-18
283EOG|1|AGroup IIC intron, 5'-R(*UP*UP*AP*UP*UP*A)-3'Co-crystallization showing exon recognition by a group II intronX-RAY DIFFRACTION3.392008-10-28
293BWP|1|AGroup IIC intronCrystal structure of a self-spliced group II intronX-RAY DIFFRACTION3.12008-04-15
304E8V|1|AGroup IIC intronOceanobacillus iheyensisStructure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+X-RAY DIFFRACTION3.992012-11-14

Release history

Release3.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.210
Date2020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-22

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#Class_IFEPDBIDAssemblyLSU_23SLSU_5SmRNAtRNA/stRNA_OccupancyA_tRNA_anticodonProtein_factors