#IFECompound(s)RNA source organismTitleMethodResolutionDate
16TPQ|1|U (rep)pre-23S rRNABacillus subtilisRNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072020-09-30
27AQD|1|A23S ribosomal RNABacillus subtilis subsp. subtilis str. 168Structure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12020-11-25
37AQC|1|A23S ribosomal RNABacillus subtilis subsp. subtilis str. 168Structure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992020-11-25
46TNN|1|Upre-23S rRNABacillus subtilisMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072020-09-30
57AS8|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY2.92020-12-09
66HA1|1|A23S ribosomal RNABacillus subtilisCryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
77O5B|1|X23S rRNA (2887-MER)Bacillus subtilis subsp. subtilis str. 168Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.332022-02-02
87OPE|1|A23S rRNABacillus subtilis subsp. subtilis str. 168RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)ELECTRON MICROSCOPY3.22021-07-21
97AS9|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH.ELECTRON MICROSCOPY3.52020-12-23
106HA8|1|A23S rRNABacillus subtilisCryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
115NJT|1|U23S ribosomal RNABacillus subtilisStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82017-06-14
123J9W|1|BA23S ribosomal RNABacillus subtilisCryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92015-04-29
136PPF|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42019-09-18
146PVK|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42019-09-18
157ASA|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome-associated quality control complex state B, multibody refinement focussed on RqcH. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY3.52020-12-23

Release history

Release3.2163.2173.2183.219
Date2022-02-022022-02-092022-02-162022-02-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_41610.12NR_4.0_41610.113.216(14) 7OPE|1|A, 7ASA|1|A, 7AS9|1|A, 7AS8|1|A, 7AQD|1|A, 7AQC|1|A, 6TPQ|1|U, 6TNN|1|U, 6PVK|1|A, 6PPF|1|A, 6HA8|1|A, 6HA1|1|A, 5NJT|1|U, 3J9W|1|BA(1) 7O5B|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_41610.12NR_4.0_41610.133.220(15) 6PVK|1|A, 7O5B|1|X, 6PPF|1|A, 7ASA|1|A, 6HA8|1|A, 7AS9|1|A, 6HA1|1|A, 7AS8|1|A, 5NJT|1|U, 7AQD|1|A, 3J9W|1|BA, 7AQC|1|A, 6TPQ|1|U, 6TNN|1|U, 7OPE|1|A(0) (2) 7SAE|1|A, 7S9U|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16TNN|1|UMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072930
26TPQ|1|URNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072924
36PVK|1|ABacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42169
46PPF|1|ABacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42471
57O5B|1|XCryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.332887
67AQC|1|AStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992820
77AQD|1|AStructure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12918
83J9W|1|BACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92923
95NJT|1|UStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82923
106HA8|1|ACryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52887
117AS9|1|ABacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH.ELECTRON MICROSCOPY3.52812
126HA1|1|ACryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12887
137OPE|1|ARqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)ELECTRON MICROSCOPY3.22814
147AS8|1|ABacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY2.92812
157ASA|1|ABacillus subtilis ribosome-associated quality control complex state B, multibody refinement focussed on RqcH. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY3.582