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Equivalence class NR_4.0_43481.4 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17UW1|1|a (rep)Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii 70S ribosome-Streptothricin-D complexElectron microscopy2.212023-04-19
27UVZ|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNAElectron microscopy2.212023-04-19
37UVX|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii 70S ribosome-Streptothricin-F complexElectron microscopy2.352023-04-19
47UVW|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii ribosome: 70S with E-site tRNAElectron microscopy2.372023-04-19
57RYG|1|aSmall subunit ribosomal RNA16S Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70SElectron microscopy2.382022-02-02
67UVY|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNAElectron microscopy2.392023-04-19
77RYH|1|aSmall subunit ribosomal RNA16S Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-TP-6076 complex: Empty 70SElectron microscopy2.432022-02-02
87UVV|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNAElectron microscopy2.52023-04-19
97M4Y|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNAElectron microscopy2.52021-05-19
107M4W|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-Eravacycline complex: 70S EmptyElectron microscopy2.552021-05-19
117RYF|1|aSmall subunit ribosomal RNA16S Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70SElectron microscopy2.652022-02-02
127M4X|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNAElectron microscopy2.662021-05-19
137M4U|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-Eravacycline complex: 30SElectron microscopy2.712021-05-19
146V3A|1|sN1Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAElectron microscopy2.822020-02-05
156V3B|1|sN1Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateElectron microscopy2.912020-02-05
167M4Z|1|aSmall subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF00177A. baumannii Ribosome-Eravacycline complex: 70S with hpfElectron microscopy2.922021-05-19
176V39|1|sN1Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNAElectron microscopy3.042020-02-05
186YT9|1|2Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyElectron microscopy2.72020-09-16
196YPU|1|2Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyElectron microscopy2.92020-09-16
206YS5|1|3Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit headElectron microscopy32020-09-16
216YTF|1|3Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit headElectron microscopy32020-09-16
226YT9|1|4Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyElectron microscopy2.72020-09-16
236YPU|1|4Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyElectron microscopy2.92020-09-16

Release history

Release3.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.309
Date2023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_43481.4NR_4.0_43481.33.279(17) 7M4Z|1|a, 6YPU|1|2, 6YTF|1|3, 6V3B|1|sN1, 6YT9|1|4, 7M4Y|1|a, 6V3A|1|sN1, 6YT9|1|2, 7M4X|1|a, 6V39|1|sN1, 7RYH|1|a, 6YS5|1|3, 7M4W|1|a, 7RYG|1|a, 6YPU|1|4, 7M4U|1|a, 7RYF|1|a(6) 7UVZ|1|a, 7UVV|1|a, 7UVX|1|a, 7UVY|1|a, 7UW1|1|a, 7UVW|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16YTF|1|3Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit headELECTRON MICROSCOPY3453
26YS5|1|3Acinetobacter baumannii ribosome-amikacin complex - 30S subunit headELECTRON MICROSCOPY3453
36V3A|1|sN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAELECTRON MICROSCOPY2.821519
46V3B|1|sN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateELECTRON MICROSCOPY2.911519
56YPU|1|2Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyELECTRON MICROSCOPY2.9894
67M4Y|1|aA. baumannii Ribosome-Eravacycline complex: 70S with E-tRNAELECTRON MICROSCOPY2.51519
77UVW|1|aA. baumannii ribosome: 70S with E-site tRNAELECTRON MICROSCOPY2.371519
87UVZ|1|aA. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNAELECTRON MICROSCOPY2.211519
97RYG|1|aA. baumannii Ribosome-TP-6076 complex: E-site tRNA 70SELECTRON MICROSCOPY2.381519
107RYH|1|aA. baumannii Ribosome-TP-6076 complex: Empty 70SELECTRON MICROSCOPY2.431519
117UVX|1|aA. baumannii 70S ribosome-Streptothricin-F complexELECTRON MICROSCOPY2.351519
127M4W|1|aA. baumannii Ribosome-Eravacycline complex: 70S EmptyELECTRON MICROSCOPY2.551519
137M4U|1|aA. baumannii Ribosome-Eravacycline complex: 30SELECTRON MICROSCOPY2.711519
146YT9|1|2Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyELECTRON MICROSCOPY2.7894
157UW1|1|aA. baumannii 70S ribosome-Streptothricin-D complexELECTRON MICROSCOPY2.211519
167M4X|1|aA. baumannii Ribosome-Eravacycline complex: 70S with P-tRNAELECTRON MICROSCOPY2.661519
177M4Z|1|aA. baumannii Ribosome-Eravacycline complex: 70S with hpfELECTRON MICROSCOPY2.921519
187UVY|1|aA. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNAELECTRON MICROSCOPY2.391519
197UVV|1|aA. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNAELECTRON MICROSCOPY2.51519
207RYF|1|aA. baumannii Ribosome-TP-6076 complex: P-site tRNA 70SELECTRON MICROSCOPY2.651519
216V39|1|sN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNAELECTRON MICROSCOPY3.041519
226YT9|1|4Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyELECTRON MICROSCOPY2.7146
236YPU|1|4Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyELECTRON MICROSCOPY2.9146
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