BGSU RNA Site //

Equivalence class NR_4.0_45673.2 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
17KGB|1|a (rep)Small subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.72022-01-19
25ZEB|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.42018-09-26
35ZEP|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.42018-09-26
46DZI|1|hSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexELECTRON MICROSCOPY3.462018-09-26
55O5J|1|ASmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Structure of the 30S small ribosomal subunit from Mycobacterium smegmatisELECTRON MICROSCOPY3.452017-07-12
65ZEU|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. smegmatis P/P state 30S ribosomal subunitELECTRON MICROSCOPY3.72018-09-26
76DZK|1|ASmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPYELECTRON MICROSCOPY3.62018-09-19
85XYU|1|ASmall subunit ribosomal RNA16S RNAMycolicibacterium smegmatisBacteriaRF00177Small subunit of Mycobacterium smegmatis ribosomeELECTRON MICROSCOPY3.452017-09-27

Release history

Release3.2143.215
Date2022-01-192022-01-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_45673.2NR_4.0_45673.13.214(7) 6DZK|1|A, 6DZI|1|h, 5ZEU|1|a, 5ZEP|1|a, 5ZEB|1|a, 5XYU|1|A, 5O5J|1|A(1) 7KGB|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_45673.2NR_4.0_97539.13.216(8) 5O5J|1|A, 5ZEP|1|a, 6DZI|1|h, 7KGB|1|a, 5ZEB|1|a, 5ZEU|1|a, 6DZK|1|A, 5XYU|1|A(0) (7) 7MT3|1|a, 7MSC|1|a, 7MSM|1|a, 7MT2|1|a, 7MT7|1|a, 7MSH|1|a, 7MSZ|1|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17KGB|1|aCryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.71511
25ZEB|1|aM. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.41506
35ZEU|1|aM. smegmatis P/P state 30S ribosomal subunitELECTRON MICROSCOPY3.71506
45ZEP|1|aM. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.41506
55O5J|1|AStructure of the 30S small ribosomal subunit from Mycobacterium smegmatisELECTRON MICROSCOPY3.451511
66DZK|1|ACryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPYELECTRON MICROSCOPY3.61511
76DZI|1|hCryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexELECTRON MICROSCOPY3.461511
85XYU|1|ASmall subunit of Mycobacterium smegmatis ribosomeELECTRON MICROSCOPY3.451379