Equivalence class NR_4.0_46995.7 Obsolete
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 6QZP|1|S2 (rep) | 18S rRNA (1740-MER) | Homo sapiens | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 2019-04-24 |
| 2 | 6EK0|1|S2 | 18S ribosomal RNA | Homo sapiens | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 2018-01-24 |
| 3 | 6G18|1|2 | pre-18S ribosomal RNA | Homo sapiens | Cryo-EM structure of a late human pre-40S ribosomal subunit - State C | ELECTRON MICROSCOPY | 3.6 | 2018-06-06 |
| 4 | 6G5I|1|2 | 18S ribosomal RNA | Homo sapiens | Cryo-EM structure of a late human pre-40S ribosomal subunit - State R | ELECTRON MICROSCOPY | 3.5 | 2018-06-06 |
| 5 | 4UG0|1|S2 | 18S ribosomal RNA | Homo sapiens | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 2015-06-10 |
| 6 | 6IP8|1|2m | 18S ribosomal RNA | Homo sapiens | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | ELECTRON MICROSCOPY | 3.9 | 2019-05-29 |
| 7 | 6IP5|1|2m | 18S ribosomal RNA | Homo sapiens | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | ELECTRON MICROSCOPY | 3.9 | 2019-05-29 |
| 8 | 6G5H|1|2 | 18S ribosomal RNA | Homo sapiens | Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature | ELECTRON MICROSCOPY | 3.6 | 2018-06-06 |
| 9 | 5AJ0|1|B1 | 18S ribosomal RNA | Homo sapiens | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 2015-05-20 |
| 10 | 5A2Q|1|2 | 18S RRNA | Homo sapiens | Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 2015-07-15 |
| 11 | 6G4S|1|2 | pre-18S ribosomal RNA | Homo sapiens | Cryo-EM structure of a late human pre-40S ribosomal subunit - State B | ELECTRON MICROSCOPY | 4 | 2018-06-06 |
| 12 | 5LKS|1|S2 | 18S ribosomal RNA | Homo sapiens | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | ELECTRON MICROSCOPY | 3.6 | 2017-04-26 |
| 13 | 5T2C|1|AA | 18S rRNA | Homo sapiens | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | ELECTRON MICROSCOPY | 3.6 | 2017-01-25 |
| 14 | 5A8L|1|B | HUMAN 18S RIBOSOMAL RNA | Homo sapiens | Human eRF1 and the hCMV nascent peptide in the translation termination complex | ELECTRON MICROSCOPY | 3.8 | 2015-12-02 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_46995.7 | NR_4.0_46995.8 | 3.79 | (14) 6IP8|1|2m, 5A2Q|1|2, 5AJ0|1|B1, 6EK0|1|S2, 6G4S|1|2, 6G5I|1|2, 5T2C|1|AA, 6G18|1|2, 4UG0|1|S2, 6G5H|1|2, 5A8L|1|B, 6IP5|1|2m, 5LKS|1|S2, 6QZP|1|S2 | (0) | (7) 6OM7|1|S2, 6OLI|1|S2, 6OM0|1|S2, 6OLE|1|S2, 6OLG|1|B1, 6OLZ|1|B1, 6OLF|1|S2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5A8L|1|B | Human eRF1 and the hCMV nascent peptide in the translation termination complex | ELECTRON MICROSCOPY | 3.8 | 67 |
| 2 | 6IP8|1|2m | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | ELECTRON MICROSCOPY | 3.9 | 1742 |
| 3 | 6IP5|1|2m | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | ELECTRON MICROSCOPY | 3.9 | 1742 |
| 4 | 5LKS|1|S2 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | ELECTRON MICROSCOPY | 3.6 | 1742 |
| 5 | 4UG0|1|S2 | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 1742 |
| 6 | 5T2C|1|AA | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | ELECTRON MICROSCOPY | 3.6 | 1742 |
| 7 | 5AJ0|1|B1 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 1708 |
| 8 | 6EK0|1|S2 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 1706 |
| 9 | 6QZP|1|S2 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 1707 |
| 10 | 6G5H|1|2 | Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature | ELECTRON MICROSCOPY | 3.6 | 1665 |
| 11 | 5A2Q|1|2 | Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 1665 |
| 12 | 6G5I|1|2 | Cryo-EM structure of a late human pre-40S ribosomal subunit - State R | ELECTRON MICROSCOPY | 3.5 | 1657 |
| 13 | 6G18|1|2 | Cryo-EM structure of a late human pre-40S ribosomal subunit - State C | ELECTRON MICROSCOPY | 3.6 | 1658 |
| 14 | 6G4S|1|2 | Cryo-EM structure of a late human pre-40S ribosomal subunit - State B | ELECTRON MICROSCOPY | 4 | 1613 |