#IFECompound(s)RNA source organismTitleMethodResolutionDate
17EZ2|1|N (rep)Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2, Holo L-16 ScaI Tetrahymena ribozymeTetrahymena thermophilaHolo L-16 ScaI Tetrahymena ribozymeELECTRON MICROSCOPY3.052021-08-25
27XSN|1|NRNA (387-MER)Tetrahymena thermophilaNative Tetrahymena ribozyme conformationELECTRON MICROSCOPY3.012022-08-03
37EZ0|1|NApo L-21 ScaI Tetrahymena ribozymeTetrahymena thermophilaApo L-21 ScaI Tetrahymena ribozymeELECTRON MICROSCOPY3.142021-08-25
47R6L|1|AGroup I intron, 5 prime fragment, Group I intron, 3 prime fragment plus 3 prime exonTetrahymena thermophila5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric constructELECTRON MICROSCOPY2.852022-05-04
57XSK|1|NRNA (388-MER)Tetrahymena thermophilaMisfolded Tetrahymena ribozyme conformation 1ELECTRON MICROSCOPY3.532022-08-03
67R6M|1|AGroup I intron, Ligated exon mimic of the Group I intronTetrahymena thermophilaPost-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric constructELECTRON MICROSCOPY3.682022-05-04
77UVT|1|ARNA (386-MER)Tetrahymena thermophilaKinetically trapped misfolded state of the Tetrahymena ribozymeELECTRON MICROSCOPY3.92022-08-31
87XSL|1|NRNA (388-MER)Tetrahymena thermophilaMisfolded Tetrahymena ribozyme conformation 2ELECTRON MICROSCOPY3.842022-08-03

Release history

Release3.2463.2473.248
Date2022-08-312022-09-072022-09-14

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_60848.2NR_4.0_60848.13.246(7) 7XSN|1|N, 7XSL|1|N, 7XSK|1|N, 7R6M|1|A, 7R6L|1|A, 7EZ2|1|N, 7EZ0|1|N(1) 7UVT|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17UVT|1|AKinetically trapped misfolded state of the Tetrahymena ribozymeELECTRON MICROSCOPY3.9386
27XSK|1|NMisfolded Tetrahymena ribozyme conformation 1ELECTRON MICROSCOPY3.53388
37XSL|1|NMisfolded Tetrahymena ribozyme conformation 2ELECTRON MICROSCOPY3.84388
47XSN|1|NNative Tetrahymena ribozyme conformationELECTRON MICROSCOPY3.01387
57EZ0|1|NApo L-21 ScaI Tetrahymena ribozymeELECTRON MICROSCOPY3.14387
67EZ2|1|NHolo L-16 ScaI Tetrahymena ribozymeELECTRON MICROSCOPY3.05392
77R6M|1|APost-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric constructELECTRON MICROSCOPY3.68356
87R6L|1|A5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric constructELECTRON MICROSCOPY2.85343