Equivalence class NR_4.0_60848.2 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 7EZ2|1|N (rep) | Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2, Holo L-16 ScaI Tetrahymena ribozyme | Tetrahymena thermophila | Holo L-16 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.05 | 2021-08-25 |
| 2 | 7XSN|1|N | RNA (387-MER) | Tetrahymena thermophila | Native Tetrahymena ribozyme conformation | ELECTRON MICROSCOPY | 3.01 | 2022-08-03 |
| 3 | 7EZ0|1|N | Apo L-21 ScaI Tetrahymena ribozyme | Tetrahymena thermophila | Apo L-21 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.14 | 2021-08-25 |
| 4 | 7R6L|1|A | Group I intron, 5 prime fragment, Group I intron, 3 prime fragment plus 3 prime exon | Tetrahymena thermophila | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 2.85 | 2022-05-04 |
| 5 | 7XSK|1|N | RNA (388-MER) | Tetrahymena thermophila | Misfolded Tetrahymena ribozyme conformation 1 | ELECTRON MICROSCOPY | 3.53 | 2022-08-03 |
| 6 | 7R6M|1|A | Group I intron, Ligated exon mimic of the Group I intron | Tetrahymena thermophila | Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 3.68 | 2022-05-04 |
| 7 | 7UVT|1|A | RNA (386-MER) | Tetrahymena thermophila | Kinetically trapped misfolded state of the Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.9 | 2022-08-31 |
| 8 | 7XSL|1|N | RNA (388-MER) | Tetrahymena thermophila | Misfolded Tetrahymena ribozyme conformation 2 | ELECTRON MICROSCOPY | 3.84 | 2022-08-03 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7UVT|1|A | Kinetically trapped misfolded state of the Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.9 | 386 |
| 2 | 7XSK|1|N | Misfolded Tetrahymena ribozyme conformation 1 | ELECTRON MICROSCOPY | 3.53 | 388 |
| 3 | 7XSL|1|N | Misfolded Tetrahymena ribozyme conformation 2 | ELECTRON MICROSCOPY | 3.84 | 388 |
| 4 | 7XSN|1|N | Native Tetrahymena ribozyme conformation | ELECTRON MICROSCOPY | 3.01 | 387 |
| 5 | 7EZ0|1|N | Apo L-21 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.14 | 387 |
| 6 | 7EZ2|1|N | Holo L-16 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.05 | 392 |
| 7 | 7R6M|1|A | Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 3.68 | 356 |
| 8 | 7R6L|1|A | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 2.85 | 343 |