Equivalence class NR_4.0_61877.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7R6Q|1|6 (rep) | ITS-2 | Saccharomyces cerevisiae BY4741 | State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model | Electron microscopy | 2.98 | 2022-11-09 | |||
| 2 | 7NAC|1|6 | 5.8S ribosomal RNA gene and internal transcribed spacer 2 | Saccharomyces cerevisiae BY4741 | State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model | Electron microscopy | 3.04 | 2022-11-09 | |||
| 3 | 7R7A|1|6 | 5.8S ribosomal RNA gene and internal transcribed spacer 2 | Saccharomyces cerevisiae BY4741 | State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model | Electron microscopy | 3.04 | 2022-11-09 | |||
| 4 | 7UOO|1|6 | ITS2 rRNA | Saccharomyces cerevisiae BY4741 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state | Electron microscopy | 2.34 | 2023-03-15 | |||
| 5 | 7V08|1|6 | ITS2 | Saccharomyces cerevisiae BY4741 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain | Electron microscopy | 2.36 | 2023-03-15 | |||
| 6 | 7U0H|1|6 | ITS2 rRNA | Saccharomyces cerevisiae BY4741 | State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model | Electron microscopy | 2.76 | 2022-12-14 |
Release history
| Release | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7R6Q|1|6 | State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model | ELECTRON MICROSCOPY | 2.98 | 87 |
| 2 | 7NAC|1|6 | State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model | ELECTRON MICROSCOPY | 3.04 | 87 |
| 3 | 7R7A|1|6 | State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model | ELECTRON MICROSCOPY | 3.04 | 87 |
| 4 | 7U0H|1|6 | State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model | ELECTRON MICROSCOPY | 2.76 | 59 |
| 5 | 7UOO|1|6 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state | ELECTRON MICROSCOPY | 2.34 | 58 |
| 6 | 7V08|1|6 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain | ELECTRON MICROSCOPY | 2.36 | 58 |