Equivalence class NR_4.0_61877.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7R6Q|1|6 (rep) | ITS-2 | Saccharomyces cerevisiae BY4741 | State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model | Electron microscopy | 2.98 | 2022-11-09 | |||
| 2 | 7NAC|1|6 | 5.8S ribosomal RNA gene and internal transcribed spacer 2 | Saccharomyces cerevisiae BY4741 | State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model | Electron microscopy | 3.04 | 2022-11-09 | |||
| 3 | 7R7A|1|6 | 5.8S ribosomal RNA gene and internal transcribed spacer 2 | Saccharomyces cerevisiae BY4741 | State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model | Electron microscopy | 3.04 | 2022-11-09 | |||
| 4 | 7UOO|1|6 | ITS2 rRNA | Saccharomyces cerevisiae BY4741 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state | Electron microscopy | 2.34 | 2023-03-15 | |||
| 5 | 7V08|1|6 | ITS2 | Saccharomyces cerevisiae BY4741 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain | Electron microscopy | 2.36 | 2023-03-15 | |||
| 6 | 7U0H|1|6 | ITS2 rRNA | Saccharomyces cerevisiae BY4741 | State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model | Electron microscopy | 2.76 | 2022-12-14 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7R6Q|1|6 | State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model | ELECTRON MICROSCOPY | 2.98 | 87 |
| 2 | 7NAC|1|6 | State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model | ELECTRON MICROSCOPY | 3.04 | 87 |
| 3 | 7R7A|1|6 | State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model | ELECTRON MICROSCOPY | 3.04 | 87 |
| 4 | 7U0H|1|6 | State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model | ELECTRON MICROSCOPY | 2.76 | 59 |
| 5 | 7UOO|1|6 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state | ELECTRON MICROSCOPY | 2.34 | 58 |
| 6 | 7V08|1|6 | Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain | ELECTRON MICROSCOPY | 2.36 | 58 |