#IFECompound(s)RNA source organismTitleMethodResolutionDate
16QZP|1|L5+ 6QZP|1|L8 (rep)28S rRNA (3773-MER), 5.8S rRNA (156-MER)High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.92019-04-24
26EK0|1|L5+ 6EK0|1|L828S ribosomal RNA, 5.8S ribosomal RNAHigh-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.92018-01-24
36OLE|1|t+ 6OLE|1|D28S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
46OM0|1|t+ 6OM0|1|D28S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
56Y2L|1|L5+ 6Y2L|1|L828S ribosomal RNA, 5.8S ribosomal RNAStructure of human ribosome in POST stateELECTRON MICROSCOPY32020-04-15
66Y0G|1|L5+ 6Y0G|1|L828S ribosomal RNA, 5.8S ribosomal RNAStructure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.22020-04-15
76OLI|1|t+ 6OLI|1|D28S ribosomal RNA, 5.8S ribosomal RNAStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.52019-06-19
86OLG|1|A2+ 6OLG|1|A328S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.42019-06-19
96Y57|1|L5+ 6Y57|1|L828S ribosomal RNA, 5.8S ribosomal RNAStructure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.52020-04-15
105T2C|1|A+ 5T2C|1|C28S rRNA, 5.8S rRNACryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.62017-01-25
116OM7|1|t+ 6OM7|1|D28S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.72019-06-19
124UG0|1|L5+ 4UG0|1|L828S ribosomal RNA, 5.8S ribosomal RNASTRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.62015-06-10
136OLF|1|t+ 6OLF|1|D28S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.92019-06-19
146IP5|1|1A+ 6IP5|1|1C28S ribosomal RNA, 5.8S ribosomal RNACryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.92019-05-29
156IP8|1|1A+ 6IP8|1|1C28S ribosomal RNA, 5.8S ribosomal RNACryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.92019-05-29
166OLZ|1|A2+ 6OLZ|1|A328S ribosomal RNA, 5.8S ribosomal RNAHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.92019-06-19
175AJ0|1|A2+ 5AJ0|1|A328S ribosomal RNA, 5.8S ribosomal RNACryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.52015-05-20
185LKS|1|L5+ 5LKS|1|L828S ribosomal RNA, 5.8S ribosomal RNAStructure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.62017-04-26
196SXO|1|L528S ribosomal RNA including ES27L-B (2839-3265)Homo sapiensCryo-EM structure of the human Ebp1-ribosome complexELECTRON MICROSCOPY3.32020-02-19
205A8L|1|A28S RIBOSOMAL RNAHomo sapiensHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.82015-12-02

Release history

Release3.1223.123
Date2020-04-152020-04-22

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15A8L|1|AHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.8253
26Y2L|1|L5+6Y2L|1|L8Structure of human ribosome in POST stateELECTRON MICROSCOPY33613
36Y0G|1|L5+6Y0G|1|L8Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.23644
46EK0|1|L5+6EK0|1|L8High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.93672
56QZP|1|L5+6QZP|1|L8High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.93696
66Y57|1|L5+6Y57|1|L8Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.53574
76IP8|1|1A+6IP8|1|1CCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.93667
86IP5|1|1A+6IP5|1|1CCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.93717
96OM7|1|t+6OM7|1|DHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.73607
106OLF|1|t+6OLF|1|DHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.93607
116OLI|1|t+6OLI|1|DStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.53607
126OLE|1|t+6OLE|1|DHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.13607
136OM0|1|t+6OM0|1|DHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.13607
146OLZ|1|A2+6OLZ|1|A3Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.93643
156OLG|1|A2+6OLG|1|A3Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.43612
165AJ0|1|A2+5AJ0|1|A3Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.53612
175LKS|1|L5+5LKS|1|L8Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.63776
184UG0|1|L5+4UG0|1|L8STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.63776
195T2C|1|A+5T2C|1|CCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.63776
206SXO|1|L5Cryo-EM structure of the human Ebp1-ribosome complexELECTRON MICROSCOPY3.3268