#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16ZMI|1|CC (rep)Transfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.62020-08-19
26ZM7|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.72020-07-29
36ZVH|1|xTransfer RNAE-site tRNAHomo sapiensEukaryaRF00005EDF1-ribosome complexElectron microscopy2.92020-08-19
46Z6N|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.92020-07-29
56ZME|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy32020-08-12
67QVP|1|CCTransfer RNAtNRA E/EHomo sapiensEukaryaRF00005Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy32022-10-12
76Z6L|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy32020-07-29
87OLD|1|5Transfer RNApe/E tRNAChaetomium thermophilum var. thermophilum DSM 1495EukaryaRF00005Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST stateElectron microscopy32022-01-26
96ZMO|1|CCTransfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.12020-08-19

Release history

Release3.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.275
Date2022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_71217.3NR_4.0_71217.23.252(8) 7OLD|1|5, 6ZVH|1|x, 6ZMO|1|CC, 6ZMI|1|CC, 6ZME|1|CC, 6ZM7|1|CC, 6Z6N|1|CC, 6Z6L|1|CC(1) 7QVP|1|CC(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16ZVH|1|xEDF1-ribosome complexELECTRON MICROSCOPY2.975
26ZMO|1|CCSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.175
36ZMI|1|CCSARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.675
46ZM7|1|CCSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.775
56ZME|1|CCSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY375
66Z6L|1|CCCryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY375
77QVP|1|CCHuman collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY375
86Z6N|1|CCCryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.975
97OLD|1|5Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST stateELECTRON MICROSCOPY375