#IFECompound(s)RNA source organismTitleMethodResolutionDate
17QI4|1|B (rep)mitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome at 2.2 A resolutionELECTRON MICROSCOPY2.212022-07-13
26ZM6|1|Bmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.592021-01-13
37PO4|1|BtRNAValHomo sapiensAssembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)ELECTRON MICROSCOPY2.562022-06-15
46ZM5|1|Bmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.892021-01-13
57ODR|1|Bmitochondrial tRNAValHomo sapiensState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.92021-06-23
67OF0|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.22021-06-09
77ODT|1|Bmitochondrial tRNAValHomo sapiensState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
87ODS|1|Bmitochondrial tRNAValHomo sapiensState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
97O9M|1|BMT-TRNAVALHomo sapiensHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.52021-06-30
107OF7|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.52021-06-23
117OF6|1|BMitochondrial tRNAValHomo sapiensStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.62021-06-09
127OF4|1|Bmitochondrial tRNAValHomo sapiensStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.72021-06-09
137OF3|1|BMitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.72021-05-19
147OF2|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.72021-06-02
157O9K|1|BMT-TRNAVALHomo sapiensHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.12021-06-30
167OF5|1|BMitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.92021-06-09
176VMI|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.962020-08-05
186VLZ|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.972020-08-05
197QH6|1|Bmitochondrial tRNAValHomo sapiensCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1ELECTRON MICROSCOPY3.082022-03-02
207A5J|1|Bmt-tRNAValHomo sapiensStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.12020-12-23
217OIC|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.12021-09-15
225OOL|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.062017-09-13
235OOM|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.032017-09-13
247L20|1|BtRNAvalHomo sapiensCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.152021-05-12
257OIA|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.22021-09-15
267OIB|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.32021-09-15
277OI9|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.32021-09-15
287A5H|1|Bmt-tRNAValHomo sapiensStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.32020-12-23
296ZSC|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.52020-09-16
307L08|1|BtRNAVALHomo sapiensCryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.492021-05-12
317OI7|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.52021-09-15
327OIE|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.52021-09-15
337OI8|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.52021-09-15
346ZSD|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.72020-09-16
356I9R|1|BtRNA ValHomo sapiensLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinELECTRON MICROSCOPY3.92020-07-08
367OID|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AELECTRON MICROSCOPY3.72021-09-15
377A5K|1|B3mt-tRNAValHomo sapiensStructure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.72020-12-23
387A5I|1|B3mt-tRNAValHomo sapiensStructure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.72020-12-23
397OG4|1|XBmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.82021-06-23
403J7Y|1|Bmt-tRNAValHomo sapiensStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.42014-10-15
416ZS9|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY42020-10-14
426ZSA|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY42020-10-21
436ZSG|1|XBmt-tRNA ValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY42020-10-14
443J9M|1|Bmt-tRNAValHomo sapiensStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.52015-04-15

Release history

Release3.2393.2403.2413.2423.2433.2443.2453.2463.247
Date2022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-07

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17QH6|1|BCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1ELECTRON MICROSCOPY3.0856
27A5I|1|B3Structure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.756
37A5K|1|B3Structure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.756
43J7Y|1|BStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.457
53J9M|1|BStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.556
67OIC|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.156
77A5H|1|BStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.356
87A5J|1|BStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.156
97OI8|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.556
107OID|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AELECTRON MICROSCOPY3.756
117OIE|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.556
127OIB|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.356
137OI9|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.356
147OI7|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.556
157OIA|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.256
165OOM|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0356
175OOL|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0656
187OF0|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.256
197OF3|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.756
207OF7|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.556
217OF5|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.956
227OF2|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.756
237OF6|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.656
247OF4|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.756
257L08|1|BCryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.4956
267L20|1|BCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.1556
277O9M|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.560
286VLZ|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.9756
296VMI|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.9656
306I9R|1|BLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinELECTRON MICROSCOPY3.960
316ZSC|1|XBHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.559
327OG4|1|XBHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.859
336ZSA|1|XBHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY459
346ZSD|1|XBHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.759
356ZS9|1|XBHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY459
366ZSG|1|XBHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY459
377QI4|1|BHuman mitochondrial ribosome at 2.2 A resolutionELECTRON MICROSCOPY2.2169
387ODR|1|BState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.972
397ODS|1|BState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
406ZM5|1|BHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.8972
416ZM6|1|BHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.5972
427ODT|1|BState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
437PO4|1|BAssembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)ELECTRON MICROSCOPY2.5669
447O9K|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.160