BGSU RNA Site //

Equivalence class NR_4.0_74023.5 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16S0X|1|a (rep)Small subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.422019-08-21
25NGM|1|AaSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF001772.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.92017-10-04
36YEF|1|aSmall subunit ribosomal RNA16S rRNA, mRNAStaphylococcus aureus subsp. aureus NCTC 8325BacteriaRF0017770S initiation complex with assigned rRNA modifications from Staphylococcus aureusELECTRON MICROSCOPY3.22021-01-27
46S13|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.582019-08-21
55ND8|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.72017-06-28
65ND9|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.72017-06-28
77KWG|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureus subsp. aureus NCTC 8325BacteriaRF00177Staphylococcus aureus 30S ribosomal subunit in presence of spermidineELECTRON MICROSCOPY3.752021-01-27
85LI0|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF0017770S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.82016-12-28
95T7V|1|ASmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.62017-05-31
105TCU|1|ASmall subunit ribosomal RNA16S RRNAStaphylococcus aureusBacteriaRF00177Methicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.92017-05-24

Release history

Release3.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.176
Date2021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_74023.5NR_4.0_74023.43.163(8) 6S0X|1|a, 5TCU|1|A, 5T7V|1|A, 5NGM|1|Aa, 5ND9|1|a, 5ND8|1|a, 5LI0|1|a, 6S13|1|a(2) 6YEF|1|a, 7KWG|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_74023.5NR_4.0_74023.63.177(10) 5TCU|1|A, 5T7V|1|A, 5NGM|1|Aa, 5ND9|1|a, 5ND8|1|a, 7KWG|1|a, 5LI0|1|a, 6YEF|1|a, 6S13|1|a, 6S0X|1|a(0) (2) 7NHM|1|a, 7NHL|1|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15T7V|1|AMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.61419
25TCU|1|AMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.91464
36YEF|1|a70S initiation complex with assigned rRNA modifications from Staphylococcus aureusELECTRON MICROSCOPY3.21540
45ND8|1|aHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.71542
55LI0|1|a70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.81547
67KWG|1|aStaphylococcus aureus 30S ribosomal subunit in presence of spermidineELECTRON MICROSCOPY3.751552
75ND9|1|aHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.71541
85NGM|1|Aa2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.91539
96S0X|1|aErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.421539
106S13|1|aErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.581539