#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V9K|1|AW (rep)transfer RNAEscherichia coli70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.52014-07-09
24V9K|1|CWtransfer RNAEscherichia coli70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.52014-07-09
34V9M|1|CWtransfer RNA, messenger RNAEscherichia coli70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION42014-07-09
44V9M|1|AWtransfer RNA, messenger RNAEscherichia coli70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION42014-07-09
54V9L|1|AWtransfer RNA, messenger RNAEscherichia coli70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.52014-07-09
64V9L|1|CWtransfer RNAEscherichia coli70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.52014-07-09
74W29|1|AWtRNA, mRNAEscherichia coli70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.82014-10-01
84W29|1|CWtRNA, mRNAEscherichia coli70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.82014-10-01
94V9J|1|AWtRNA-Met, messenger RNAEscherichia coli70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.862014-07-09
104V9J|1|CWtRNA-Met, messenger RNAEscherichia coli70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.862014-07-09
116Q97|1|8tRNA-MetEscherichia coliStructure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.92019-03-13

Release history

Release3.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.95
Date2019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_78233.2NR_4.0_78233.13.65(10) 4V9J|1|AW, 4W29|1|CW, 4W29|1|AW, 4V9M|1|CW, 4V9M|1|AW, 4V9L|1|CW, 4V9L|1|AW, 4V9K|1|CW, 4V9K|1|AW, 4V9J|1|CW(1) 6Q97|1|8(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14W29|1|AW70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.877
24W29|1|CW70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.877
34V9J|1|AW70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.8677
44V9K|1|CW70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.577
54V9K|1|AW70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.577
64V9M|1|AW70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION477
74V9L|1|AW70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.577
84V9L|1|CW70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.577
94V9M|1|CW70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION477
104V9J|1|CW70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.8677
116Q97|1|8Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.977