Equivalence class NR_4.0_80570.10 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6N6C|1|D (rep) | RNA (5'-R(P*AP*A)-3') | synthetic construct | Vibrio cholerae Oligoribonuclease bound to pAA | X-ray diffraction | 1.62 | 2019-06-12 | |||
| 2 | 6N6J|1|C | RNA (5'-R(P*AP*A)-3') | synthetic construct | Human REXO2 bound to pAA | X-ray diffraction | 1.32 | 2019-06-12 | |||
| 3 | 6N6J|1|D | RNA (5'-R(P*AP*A)-3') | synthetic construct | Human REXO2 bound to pAA | X-ray diffraction | 1.32 | 2019-06-12 | |||
| 4 | 6P7Q|1|E | RNA (5'-R(P*AP*A)-3') | Escherichia coli | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-ray diffraction | 1.66 | 2019-12-25 | |||
| 5 | 6P7Q|1|F | RNA (5'-R(P*AP*A)-3') | Escherichia coli | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-ray diffraction | 1.66 | 2019-12-25 | |||
| 6 | 6P7Q|1|D | RNA (5'-R(P*AP*A)-3') | Escherichia coli | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-ray diffraction | 1.66 | 2019-12-25 | |||
| 7 | 6RCL|1|C | RNA (5'-R(P*AP*A)-3') | synthetic construct | Crystal structure of REXO2-D199A-AA | X-ray diffraction | 1.97 | 2019-10-09 | |||
| 8 | 5JJU|1|C | RNA (5'-R(P*AP*A)-3') | synthetic construct | Crystal structure of Rv2837c complexed with 5'-pApA and 5'-AMP | X-ray diffraction | 2.31 | 2016-05-04 | |||
| 9 | 4EJT|1|G | 5'-R(*AP*A)-3' | Staphylococcus epidermidis TcaR in complex with RNA | X-ray diffraction | 3 | 2013-06-05 |
Release history
| Release | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 | 3.156 | 3.157 | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 | 3.179 | 3.180 | 3.181 | 3.182 | 3.183 | 3.184 | 3.185 | 3.186 | 3.187 | 3.188 | 3.189 | 3.190 | 3.191 | 3.192 | 3.193 | 3.194 | 3.195 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 | 2020-12-09 | 2020-12-16 | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 | 2021-05-19 | 2021-05-26 | 2021-06-02 | 2021-06-09 | 2021-06-16 | 2021-06-23 | 2021-06-30 | 2021-07-07 | 2021-07-14 | 2021-07-21 | 2021-07-28 | 2021-08-04 | 2021-08-11 | 2021-08-18 | 2021-08-25 | 2021-09-01 | 2021-09-08 |
Parents
Children
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6N6J|1|D | Human REXO2 bound to pAA | X-RAY DIFFRACTION | 1.32 | 3 |
| 2 | 6RCL|1|C | Crystal structure of REXO2-D199A-AA | X-RAY DIFFRACTION | 1.97 | 2 |
| 3 | 6P7Q|1|D | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-RAY DIFFRACTION | 1.66 | 2 |
| 4 | 4EJT|1|G | Staphylococcus epidermidis TcaR in complex with RNA | X-RAY DIFFRACTION | 3 | 2 |
| 5 | 5JJU|1|C | Crystal structure of Rv2837c complexed with 5'-pApA and 5'-AMP | X-RAY DIFFRACTION | 2.31 | 2 |
| 6 | 6P7Q|1|F | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-RAY DIFFRACTION | 1.66 | 2 |
| 7 | 6N6J|1|C | Human REXO2 bound to pAA | X-RAY DIFFRACTION | 1.32 | 3 |
| 8 | 6N6C|1|D | Vibrio cholerae Oligoribonuclease bound to pAA | X-RAY DIFFRACTION | 1.62 | 2 |
| 9 | 6P7Q|1|E | Structure of E. coli MS115-1 NucC, 5'-pApA bound form | X-RAY DIFFRACTION | 1.66 | 2 |