Equivalence class NR_4.0_83618.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7QI4|1|Ax (rep) | Transfer RNA | P/P-tRNA, mRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome at 2.2 A resolution | Electron microscopy | 2.21 | 2022-07-13 |
| 2 | 6ZM6|1|x | Transfer RNA | P-site tRNA, mRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA | Electron microscopy | 2.59 | 2021-01-13 |
| 3 | 7QI5|1|Ax | Transfer RNA | P/P-tRNA, mRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution | Electron microscopy | 2.63 | 2023-07-05 |
| 4 | 7QI5|1|Ay | Transfer RNA | E/E-tRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution | Electron microscopy | 2.63 | 2023-07-05 |
| 5 | 8ANY|1|Ax | Transfer RNA | P/P-tRNA, mRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA | Electron microscopy | 2.85 | 2023-08-16 |
| 6 | 8ANY|1|Ay | Transfer RNA | E/E-tRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA | Electron microscopy | 2.85 | 2023-08-16 |
| 7 | 6ZM5|1|x | Transfer RNA | P-site tRNA, mRNA | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide | Electron microscopy | 2.89 | 2021-01-13 |
Release history
| Release | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_83618.1 | NR_4.0_29127.1 | 3.296 | (2) 6ZM5|1|x, 6ZM6|1|x | (5) 8ANY|1|Ay, 8ANY|1|Ax, 7QI5|1|Ay, 7QI5|1|Ax, 7QI4|1|Ax | (0) |
| NR_4.0_83618.1 | NR_4.0_43682.1 | 3.296 | (2) 7QI5|1|Ax, 7QI4|1|Ax | (5) 8ANY|1|Ay, 8ANY|1|Ax, 7QI5|1|Ay, 6ZM6|1|x, 6ZM5|1|x | (0) |
| NR_4.0_83618.1 | NR_4.0_83069.1 | 3.296 | (1) 7QI5|1|Ay | (6) 8ANY|1|Ay, 8ANY|1|Ax, 7QI5|1|Ax, 7QI4|1|Ax, 6ZM6|1|x, 6ZM5|1|x | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7QI4|1|Ax | Human mitochondrial ribosome at 2.2 A resolution | ELECTRON MICROSCOPY | 2.21 | 70 |
| 2 | 7QI5|1|Ax | Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution | ELECTRON MICROSCOPY | 2.63 | 70 |
| 3 | 8ANY|1|Ax | Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA | ELECTRON MICROSCOPY | 2.85 | 70 |
| 4 | 6ZM5|1|x | Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide | ELECTRON MICROSCOPY | 2.89 | 70 |
| 5 | 6ZM6|1|x | Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA | ELECTRON MICROSCOPY | 2.59 | 70 |
| 6 | 7QI5|1|Ay | Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution | ELECTRON MICROSCOPY | 2.63 | 70 |
| 7 | 8ANY|1|Ay | Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA | ELECTRON MICROSCOPY | 2.85 | 70 |